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Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank243Aligned Residues249
% Identity21%Templatec3txoA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:protein kinase c eta type; PDBTitle: pkc eta kinase in complex with a naphthyridine
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   365....370.........380.........390.........400.. .......410.........420. .
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Query Sequence  TLEDNELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA. NDPALKDELLAEANVMQQL. D
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Template Sequence  FEFIRVLGKGSFGKVMLARVKETGDL. . YAVKVLKKDVILQDDDVECTMTEKRILSLARN
Template Known Secondary structure  TTTTT

..TTTTT
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   355....360.........370.........380 .........390.........400.........410..
 
   423......430...... ...440.........450.........460.........470.........480.
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Query Sequence  NPYIVRMIGICEAE. SWMLVMEMAELGPLNKYLQQNRHIKDKNIIELVHQVSMGMKYLEE
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Template Sequence  HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD
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TTB


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   413......420.........430.........440.........450.........460.........470..
 
   482.......490.........500.........510.........520.........530.........540.
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Query Sequence  SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY
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Template Sequence  KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICGT. . . . . . . . . . . . PDYIAPEILQEM
Template Known Secondary structure  TT
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GGG
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TT
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   473......480.........490.........500........ .510.........520
 
   542.......550.........560.........570.........580.........590.........600.
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Query Sequence  KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNL
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Template Sequence  LYGPAVDWWAMGVLLYEMLC. GHAPFEAENEDDLFEAILNDE. VVYPTWLHEDATGILKS
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   530.........540......... 550.........560.........570 .........580.......
 
   602.......610...... ...620.........
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Query Sequence  CWTYDVENRPGFTAV. . . ELRLRNYYYDVVN
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Template Sequence  FMTKNPTMRLGSLTQGGEHAILRHPFFKEID
Template Known Secondary structure  T
SSGGGSTTSGGGT
TTSGGGTT

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   588.590.........600.........610........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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