Return to main results Retrieve Phyre Job Id

Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank199Aligned Residues246
% Identity20%Templatec3rp9A_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase; PDBTitle: crystal structure of the apo mapk from toxoplasma gondii, 25.m01780 or2 tgme49_007820
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   365....370.........380.........390.........400.........410.........420....
Predicted Secondary structure 



















Query SS confidence 



























































Query Sequence  TLEDNELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP
Query Conservation        

 
 

 
             



 
               
  

  
 
 
Alig confidence 
















...........































Template Conservation 
     

 
 

 
  ...........



 
               

 

  
 

Template Sequence  YEIRHLHVCEAYDKLRV. . . . . . . . . . . VAIKKILRVFEDLIDCKRILREIAILNRLNHD
Template Known Secondary structure 






...........
STTSS


T
Template Predicted Secondary structure 



...........









Template SS confidence 



























































   55....60.........70. ........80.........90.........100...
 
   425....430... ......440.........450.........460.........470........
Predicted Secondary structure 
......













Query SS confidence 








. . . . . .












































Query Sequence  YIVRMIGIC. . . . . . EAESWMLVMEMAELGPLNKYLQQNRHIKDKNIIELVHQVSMGMKY
Query Conservation   

   
  ......      

 
    


   
                

  

 
Alig confidence 








......














.




























Template Conservation 


 
                

 
     .          
       
  

  

  
Template Sequence  HVVKVLDIVIPKDVEKFDELYVVLEIADSD. FKKLFRTPVYLTELHIKTLLYNLLVGVKY
Template Known Secondary structure  TB




S
TTT





S.SS



Template Predicted Secondary structure 












.








Template SS confidence 



























































   113......120.........130.........140.. .......150.........160.........170.
 
   479480.........490.........500.........510.........520.........530........
Predicted Secondary structure 



































Query SS confidence 



























































Query Sequence  LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI
Query Conservation 

   






  



      

 




                  
    


  
Alig confidence 

















































...






Template Conservation 

   
 
 
    
            

                     ...   

  
Template Sequence  VHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPVTRW. . . YRAPELI
Template Known Secondary structure  TT
B




GGG
TT




TT
B
TTS
TT








T...T

Template Predicted Secondary structure 










































...






Template SS confidence 



























































   172.......180.........190.........200.........210.........220. .......
 
   539 540.........550.........560.........570.
Predicted Secondary structure  .














..........................
Query SS confidence 
.































. . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  N. YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK. . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation   .       




 

 
 
  
 
  
     ..........................
Alig confidence 
.





















.








..........................
Template Conservation            
 

 
  
 


 .
                          
       
Template Sequence  LLQENYTEAIDVWSIGCIFAELLN. MIKENVAYHADRGPLFPTRGNRDQLNVIFNILGTP
Template Known Secondary structure  TT




TT.TSTTT
SSGGG


S





Template Predicted Secondary structure 












.
























Template SS confidence 



























































   256...260.........270......... 280.........290.........300.........310....
 
   572.......580......... 590.........600.........610......
Predicted Secondary structure  .........








......









Query SS confidence  . . . . . . . . .

















. . . . . .


























Query Sequence  . . . . . . . . . GSEVTAMLEKGERMGCPA. . . . . . GCPREMYDLMNLCWTYDVENRPGFTAV
Query Conservation  .........       
        
 ......  
     
   
    
  


   
Alig confidence  .........

















......


























Template Conservation                                     
    


  

  

  



 
 
Template Sequence  SEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINEC
Template Known Secondary structure 
TSS
TTS






GGGGSTTS
S
SSTTTS

Template Predicted Secondary structure 























Template SS confidence 



























































   335....340.........350.........360.........370.........380.........390....
 
   617..620.........
Predicted Secondary structure 

Query SS confidence 












Query Sequence  ELRLRNYYYDVVN
Query Conservation     
         
Alig confidence  ...









Template Conservation  ...
 

 
    
Template Sequence  . . . LAHPFFKEVR
Template Known Secondary structure  ...SGGGTTT
Template Predicted Secondary structure  ...





Template SS confidence 












   395....400....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D