Job Description P48025 Confidence 100.00% Date Wed Jul 10 14:17:05 BST 2013 Rank 175 Aligned Residues 244 % Identity 19% Template c3qd2B_ PDB info PDB header:gene regulation Chain: B: PDB Molecule:eukaryotic translation initiation factor 2-alpha kinase 3; PDBTitle: crsytal structure of mouse perk kinase domain Resolution 2.81 Å

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		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	E	D	N	E	L	G	S	G	N	F	G	T	V	K	K	G	Y	Y	Q	M	K	K	V	V	K	T	V	A	V	K	I	L	K	N	E	A	N	D	P	A	L	K	D	E	L	L	A	E	A	N	V	M	Q	Q	L	D	N	P
Query Conservation
Alig confidence												.																.	.										.
Template Conservation												.																.	.										.
Template Sequence		F	E	P	I	Q	C	M	G	R	G	.	F	G	V	V	F	E	A	K	N	K	V	D	D	C	N	.	.	Y	A	I	K	R	I	R	L	P	.	N	R	E	L	A	R	E	K	V	M	R	E	V	K	A	L	A	K	L	E	H	P
Template Known Secondary structure												.		S								T	T	T				.	.										.	S	T	T	T													T	S				T
Template Predicted Secondary structure												.																.	.										.
Template SS confidence
		589	590	.	.	.	.	.	.	.	.		.	600	.	.	.	.	.	.	.	.	.	610	.	.	.			.	.	.	.	.	.	620	.	.		.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.
		425	.	.	.	.	430	.	.	.	.	.	.	.															.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.				460	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Query Sequence		Y	I	V	R	M	I	G	I	C	E	A	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	M	L	V	M	E	M	A	E	L	G	P	L	N	K	Y	L	Q	Q	N	R	H	.	.	.	I	K	D	K	N	I	I	E
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation
Template Sequence		G	I	V	R	Y	F	N	A	W	L	E	T	P	P	E	K	W	Q	E	E	M	D	E	P	K	V	Y	L	Y	I	Q	M	Q	L	C	R	K	E	N	L	K	D	W	M	N	R	R	C	S	L	E	D	R	E	H	G	V	C	L	H
Template Known Secondary structure		T	B												S																							S	S								T			S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		646	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.
		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	H	Q	V	S	M	G	M	K	Y	L	E	E	S	N	F	V	H	R	D	L	A	A	R	N	V	L	L	V	T	Q	H	Y	A	K	I	S	D	F	G	L	S	K	A	L	R	A	D	E	N	Y	Y	K	A	Q	T	H	G	K
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.
Template Sequence		I	F	I	Q	I	A	E	A	V	E	F	L	H	S	K	G	L	M	H	R	D	L	K	P	S	N	I	F	F	T	M	D	D	V	V	K	V	G	D	F	G	L	V	T	A	M	.	.	.	.	.	.	.	D	Q	D	T	H	G	Q
Template Known Secondary structure																T	T								G	G	G					T	T									T	T					.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.
Template SS confidence
		915	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960								.	.	.	.	.	.	.
		528	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	P	V	K	W	Y	A	P	E	C	I	N	Y	Y	K	F	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	A	F	S	Y	G	Q	K	P	Y	R	G	M	K	G	S	E	V	T	A	M	L	E	K	G	E	R	M	G	C
Query Conservation
Alig confidence																																				.						.	.
Template Conservation																																				.						.	.
Template Sequence		V	T	K	L	Y	M	S	P	E	Q	I	H	G	N	N	Y	S	H	K	V	D	I	F	S	L	G	L	I	L	F	E	L	L	Y	.	S	F	S	T	Q	.	.	M	E	R	V	R	I	I	T	D	V	R	N	L	K	F	P	L	L
Template Known Secondary structure				G	G	G	S												T																S	.						.	.												T	T
Template Predicted Secondary structure																																				.						.	.
Template SS confidence
		983	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.		.	.	.	1020	.			.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.
		588	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	G	C	P	R	E	M	Y	D	L	M	N	L	C	W	T	Y	D	V	E	N	R	P	G	F	T	A	V	E	L	R	L	R	N	Y	Y	Y
Query Conservation
Alig confidence																															.	.	.
Template Conservation																															.	.	.
Template Sequence		F	T	Q	K	Y	P	Q	E	H	M	M	V	Q	D	M	L	S	P	S	P	T	E	R	P	E	A	T	D	I	.	.	.	I	E	N	A	I	F
Template Known Secondary structure																			S	S	G	G	G	S							.	.	.			S	T	T
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		1041	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.				1070	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D