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Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank30Aligned Residues238
% Identity28%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   371........380.........390.........400.........410.........420.........430
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Query Sequence  LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI
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Template Sequence  RKLGSYGEVLLCKEKNGHSE. . KAIKVIKKKF. . . . . HEEIYNEISLLKSLDHPNIIKLF
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   61........70.........80 .........90 .........100.........110...
 
   431..... ...440.........450.........460.........470.........480.........
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Query Sequence  GICEAE. SWMLVMEMAELGPLNKYLQQNRHIKDKNIIELVHQVSMGMKYLEESNFVHRDL
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Template Sequence  DVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDI
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   132.......140.........150.........160.........170.........180.........190.
 
   490...... ...500.........510.........520.........530.........540......
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Query Sequence  AARNVLL. . . VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK
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Template Sequence  KPENILLENKNSLLNIKIVDFGLSSFFSKDYK. . . . LRDRLGTAYYIAPEVL. KKKYNEK
Template Known Secondary structure  SGGGSSTT

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   192.......200.........210.........220... ......230......... 240......
 
   547..550.........560.........570.........580........ .590.........600..
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Query Sequence  SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP. . . . AGCPREMYDLMNLC
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Template Sequence  CDVWSCGVIMYILLC. GYPPFGGQNDQDIIKKVEKGK. YYFDFNDWKNISDEAKELIKLM
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   247..250.........260. ........270.........280.. .......290.........300....
 
   603......610.........620.....
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Query Sequence  WTYDVENRPGFTAVELRLRNYYY
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Template Sequence  LTYDYNKRCTAEEA. . . LNSRWI
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   305....310........ .320....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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