Job Description P48025 Confidence 100.00% Date Wed Jul 10 14:17:05 BST 2013 Rank 32 Aligned Residues 274 % Identity 33% Template c3plsA_ PDB info PDB header:transferase Chain: A: PDB Molecule:macrophage-stimulating protein receptor; PDBTitle: ron in complex with ligand amp-pnp Resolution 2.24 Å

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		355	.	.	.	.	360	.	.	.	.	.	.	.		.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure															.																							.
Query SS confidence															.																							.
Query Sequence		K	E	V	Y	L	D	R	S	L	L	T	L	E	.	D	N	E	L	G	S	G	N	F	G	T	V	K	K	G	Y	Y	Q	M	K	K	V	.	V	K	T	V	A	V	K	I	L	K	N	E	A	N	D	P	A	L	K	D	E	L	L
Query Conservation															.																							.
Alig confidence															.																							.														.
Template Conservation																																																				.
Template Sequence		K	D	V	L	I	P	H	E	R	V	V	T	H	S	D	R	V	I	G	K	G	H	F	G	V	V	Y	H	G	E	Y	I	D	Q	A	Q	N	R	I	Q	C	A	I	K	S	L	S	R	I	T	.	E	M	Q	Q	V	E	A	F	L
Template Known Secondary structure		G	G	G	B			G	G	G													T	T											S	S	S											T	T			.	S
Template Predicted Secondary structure																																																				.
Template SS confidence
		1071	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120		.	.	.	.	.	.	.	.	.
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.			.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.		.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.																						.
Query SS confidence																											.	.																						.
Query Sequence		A	E	A	N	V	M	Q	Q	L	D	N	P	Y	I	V	R	M	I	G	I	C	E	A	E	S	.	.	W	M	L	V	M	E	M	A	E	L	G	P	L	N	K	Y	L	Q	Q	N	R	.	H	I	K	D	K	N	I	I	E	L	V
Query Conservation																											.	.																						.
Alig confidence																											.	.																						.
Template Conservation
Template Sequence		R	E	G	L	L	M	R	G	L	N	H	P	N	V	L	A	L	I	G	I	M	L	P	P	E	G	L	P	H	V	L	L	P	Y	M	C	H	G	D	L	L	Q	F	I	R	S	P	Q	R	N	P	T	V	K	D	L	I	S	F	G
Template Known Secondary structure									T				T	T	B										S	S	S										T	T		B								T	T				B
Template Predicted Secondary structure
Template SS confidence
		1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.
		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		H	Q	V	S	M	G	M	K	Y	L	E	E	S	N	F	V	H	R	D	L	A	A	R	N	V	L	L	V	T	Q	H	Y	A	K	I	S	D	F	G	L	S	K	A	L	R	A	D	E	N	Y	Y	K	A	Q	T	H	G	K	W	.
Query Conservation																																																													.
Alig confidence																																																													.
Template Conservation
Template Sequence		L	Q	V	A	R	G	M	E	Y	L	A	E	Q	K	F	V	H	R	D	L	A	A	R	N	C	M	L	D	E	S	F	T	V	K	V	A	D	F	G	L	A	R	D	I	L	D	R	E	Y	Y	S	V	Q	Q	H	R	H	A	R	L
Template Known Secondary structure														T	T				S			S	G	G	G					T	T								T	T	S	S		T	T	T	T	G	G	G	G		S			S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.
		529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	K	W	Y	A	P	E	C	I	N	Y	Y	K	F	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	A	F	S	Y	G	Q	K	P	Y	R	G	M	K	G	S	E	V	T	A	M	L	E	K	G	E	R	M	G	C	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	K	W	T	A	L	E	S	L	Q	T	Y	R	F	T	T	K	S	D	V	W	S	F	G	V	L	L	W	E	L	L	T	R	G	A	P	P	Y	R	H	I	D	P	F	D	L	T	H	F	L	A	Q	G	R	R	L	P	Q	P
Template Known Secondary structure		G	G	G	G	S						T	T																						T	S			T	T	T	T	S		G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.
		589	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	C	P	R	E	M	Y	D	L	M	N	L	C	W	T	Y	D	V	E	N	R	P	G	F	T	A	V	E	L	R	L	R	N	Y	Y	Y	D	V	V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Y	C	P	D	S	L	Y	Q	V	M	Q	Q	C	W	E	A	D	P	A	V	R	P	T	F	R	V	L	V	G	E	V	E	Q	I	V	S	A	L	L	G
Template Known Secondary structure		T	T													T		S	S	G	G	G	S																			S
Template Predicted Secondary structure
Template SS confidence
		1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D