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Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank311Aligned Residues236
% Identity25%Templatec3pg1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase, putative (map kinase-like PDBTitle: map kinase lmampk10 from leishmania major (1.95 angs resolution)
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   365....370.........380.........390.........400... ......410.....
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Query Sequence  TLEDNELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN. . . . . . . . . DPALKDELLAEA
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Template Sequence  YTVQRFISSGSYGAVCAGVD. . . SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREI
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   23......30.........40.. .......50.........60.........70.........
 
   416...420.........430....... ..440.........450.........460.........
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Query Sequence  NVMQQLDNPYIVRMIGICEAES. . . . . . WMLVMEMAELGPLNKYLQQNRHIKDKNIIELV
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Template Sequence  RLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFM
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   80.........90.........100.........110.........120.........130.........
 
   470.........480.........490.........500.........510.........520.........
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Query Sequence  HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP
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Template Sequence  YHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLHR. . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT






GGG
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   140.........150.........160.........170.........180.
 
   530......... 540.........550.........560.........570.........580......
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Query Sequence  VKWYAPECIN. YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG. .
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Template Sequence  . WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN. RKALFRGSTFYNQLNKIVEVVGTPKI
Template Known Secondary structure  .GG

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   197..200.........210.........220........ .230.........240.........250....
 
   587..590.........600.........610.......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . CPAGCPREMYDLMNLCWTYDVENRPGFTAVE
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Template Sequence  EDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQA.
Template Known Secondary structure  TS
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   255....260.........270.........280.........290.........300.........310...
 
   618.620......
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Query Sequence  LRLRNYYYD
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Template Sequence  . . LRHPYFE
Template Known Secondary structure  ..TSGGGT
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   314.....320
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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