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Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank17Aligned Residues351
% Identity20%Templatec3pfqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c beta type; PDBTitle: crystal structure and allosteric activation of protein kinase c beta2 ii
Resolution4.00 Å
Model Dimensions (Å)X:101.540 Y:98.229 Z:49.141

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   271........280.........290.........300.........310.........320.........330
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Query Sequence  PNAHPVTWSPGGIISRIKSYSFPKPGHKKPAPPQGSRPESTVSFNPYEPTGGPWGPDRGL
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Template Sequence  PDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSF
Template Known Secondary structure  S
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SS
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   202.......210.........220.........230.........240.........250.........260.
 
   331........340.........350.........360.........370.........380.........390
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Query Sequence  QREALPMDTEVYESPYADPEEIRPKEVYLDRSLLTLEDNELGSGNFGTVKKGYYQMKKVV
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Template Sequence  GISELQKAGVDGWFKLLSQEEGEYFNVPVPPLTDFNFLMVLGKGSFGKVMLSERKGTDEL
Template Known Secondary structure  BTT


B
TTGGGT





TTSSBTTTB
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   262.......270.........280.........290.........300.........310.........320.
 
   391........400.. .......410.........420. ........430....... ..440.......
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Query Sequence  KTVAVKILKNEA. NDPALKDELLAEANVMQQL. DNPYIVRMIGICEAES. WMLVMEMAEL
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Template Sequence  . . YAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNG
Template Known Secondary structure  ..TTTTT
TT

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B
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   368.370.........380.........390.........400.........410.........420.....
 
   448.450.........460.........470.........480.........490.........500.......
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Query Sequence  GPLNKYLQQNRHIKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDF
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Template Sequence  GDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADF
Template Known Secondary structure 
BSS

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   426...430.........440.........450.........460.........470.........480.....
 
   508.510.........520.........530.........540.........550.........560.......
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Query Sequence  GLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY
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Template Sequence  GMCKENIWDG. . . . VTTKFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA. GQAPF
Template Known Secondary structure  TT



TT....

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BST.SS
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   486...490..... ....500.........510.........520.........530..... ....540
 
   568.570.........580.........590.........600.........610... ......620.....
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Query Sequence  RGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGF. . TAVELRLRNYYY
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Template Sequence  EGEDEDELFQSIMEHN. VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFF
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SSSS
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TTS
S
SSSTT
TT
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   542.......550....... ..560.........570.........580.........590.........600
 
   626...
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Query Sequence  DVVN
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Template Conservation      
Template Sequence  RYID
Template Known Secondary structure  SS

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   601...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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