Job Description P48025 Confidence 100.00% Date Wed Jul 10 14:17:05 BST 2013 Rank 177 Aligned Residues 273 % Identity 17% Template c3op5B_ PDB info PDB header:transferase Chain: B: PDB Molecule:serine/threonine-protein kinase vrk1; PDBTitle: human vaccinia-related kinase 1 Resolution 2.40 Å

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		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.			.	.	.	.	.	.	380	.	.	.	.				.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure																										.	.												.	.	.
Query SS confidence																										.	.												.	.	.
Query Sequence		E	E	I	R	P	K	E	V	Y	L	D	R	S	L	L	T	L	E	D	N	E	L	G	S	.	.	G	N	F	G	T	V	K	K	G	Y	Y	.	.	.	Q	M	K	K	V	V	K	T	V	A	V	K	I	L	K	N	E	A	N	D
Query Conservation																										.	.												.	.	.
Alig confidence																				.	.	.				.	.												.	.	.
Template Conservation																				.	.	.
Template Sequence		E	Q	F	A	V	G	E	I	I	T	D	M	A	A	A	A	W	K	.	.	.	V	G	L	P	I	G	Q	F	G	C	I	Y	L	A	D	M	N	S	S	E	S	V	G	S	D	A	P	C	V	V	K	V	E	P	S	D	N	G	P
Template Known Secondary structure				S		T	T						T	T						.	.	.						.													S	S				T	T		S								T	T
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		405	.	.	.	.										410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.						.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure							.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Query Sequence		P	A	L	K	D	.	.	.	.	.	.	.	.	.	E	L	L	A	E	A	N	V	M	Q	Q	L	D	N	P	Y	I	V	R	M	I	G	I	C	E	.	.	.	.	.	A	E	S	W	M	L	V	M	E	M	A	E	L	G	P	L
Query Conservation							.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.																										.	.	.	.	.												.
Template Conservation																																																									.
Template Sequence		L	F	T	E	L	K	F	Y	Q	R	A	A	K	P	E	Q	I	Q	K	W	I	R	T	R	K	L	K	Y	L	G	V	P	K	Y	W	G	S	G	L	H	D	K	N	G	K	S	Y	R	F	M	I	M	D	R	F	.	G	S	D	L
Template Known Secondary structure																									T	T		S				S												T	T												.
Template Predicted Secondary structure																																																									.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.
		451	.	.	.	.	.	.	.		.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.			.	500	.	.	.	.	.	.	.
Predicted Secondary structure										.																																									.	.
Query SS confidence										.																																									.	.
Query Sequence		N	K	Y	L	Q	Q	N	R	.	H	I	K	D	K	N	I	I	E	L	V	H	Q	V	S	M	G	M	K	Y	L	E	E	S	N	F	V	H	R	D	L	A	A	R	N	V	L	L	V	T	.	.	Q	H	Y	A	K	I	S	D	F
Query Conservation										.																																									.	.
Alig confidence										.																																									.	.
Template Conservation
Template Sequence		Q	K	I	Y	E	A	N	A	K	R	F	S	R	K	T	V	L	Q	L	S	L	R	I	L	D	I	L	E	Y	I	H	E	H	E	Y	V	H	G	D	I	K	A	S	N	L	L	L	N	Y	K	N	P	D	Q	V	Y	L	V	D	Y
Template Known Secondary structure								T	T	S																								T	T								G	G	G					S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		508	.	510	.	.	.					.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.
Predicted Secondary structure								.	.	.	.
Query SS confidence								.	.	.	.
Query Sequence		G	L	S	K	A	L	.	.	.	.	R	A	D	E	N	Y	Y	K	A	Q	T	H	G	K	W	P	V	K	W	Y	A	P	E	C	I	N	Y	Y	K	F	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	A	F	S	Y	G
Query Conservation								.	.	.	.
Alig confidence								.	.	.	.																																																	.
Template Conservation																																																												.
Template Sequence		G	L	A	Y	R	Y	C	P	E	G	V	H	K	A	Y	A	A	D	P	K	R	C	H	D	G	T	I	E	F	T	S	I	D	A	H	N	G	V	A	P	S	R	R	G	D	L	E	I	L	G	Y	C	M	I	Q	W	L	T	.	G
Template Known Secondary structure		T	T				S	S	G	G	G					S	S			S	S							T	T	T							T	T																						.	S
Template Predicted Secondary structure																																																												.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.
		564	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.											.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	K	P	Y	R	G	M	K	G	S	E	V	T	A	M	L	E	K	G	E	R	M	.	.	.	.	.	.	.	.	.	.	G	C	P	A	G	C	P	R	E	M	Y	D	L	M	N	L	C	W	T	Y	D	V	E	N	R	P	G	F
Query Conservation																								.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	L	P	W	E	D	N	L	K	D	P	K	Y	V	R	D	S	K	I	R	Y	R	E	N	I	A	S	L	M	D	K	C	F	P	A	A	N	A	P	G	E	I	A	K	Y	M	E	T	V	K	L	L	D	Y	T	E	K	P	L	Y
Template Known Secondary structure				T	T	G	G	G	T	T																								S		T	T															T			T	T
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		614	.	.	.	.	.	620	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	V	E	L	R	L	R	N	Y	Y	Y	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	N	L	R	D	I	L	L	Q	G	L	K	A	I
Template Known Secondary structure															T
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D