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Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank298Aligned Residues243
% Identity22%Templatec3n9xA_
PDB info PDB header:transferaseChain: A: PDB Molecule:phosphotransferase; PDBTitle: crystal structure of map kinase from plasmodium berghei, pb000659.00.0
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   365....370.........380.........390.........400.........410.........420....
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Query Sequence  TLEDNELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP
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Template Sequence  YIIKHLIGRGSYGYVYLAYDKNTE. . KNVAIKKVNRMFEDLIDCKRILREITILNRLKSD
Template Known Secondary structure  TTTTTT..
STTTS


T
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   28.30.........40.........50. ........60.........70.........80.....
 
   425....430....... ..440.........450.........460.........470........
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Query Sequence  YIVRMIGICEAES. . . . . . WMLVMEMAELGPLNKYLQQNRHIKDKNIIELVHQVSMGMKY
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Template Sequence  YIIRLYDLIIPDDLLKFDELYIVLEIADS. DLKKLFKTPIFLTEEHIKTILYNLLLGENF
Template Known Secondary structure  TB




S
TTT




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   86...90.........100.........110.... .....120.........130.........140....
 
   479480.........490.........500.........510.........520.........530........
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Query Sequence  LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI
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Template Sequence  IHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTIHVVTR. . . . . . . . . . . . WYRAPELI
Template Known Secondary structure  TT




GGG
TT




TT






............TT

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   145....150.........160.........170.........180.... .....190..
 
   539 540.........550.........560.........570.
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Query Sequence  N. YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK. . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LLQENYTKSIDIWSTGCIFAELLN. MLQSHINDPTNRFPLFPGSSCFPHEKSNRDQLNII
Template Known Secondary structure  TT
S


TT.T
TTT
SSGGG


S


S
S


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   224.....230.........240....... ..250.........260.........270.........280..
 
   572.......580...... ...590.........600.........
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Query Sequence  . . . . . . . . . . . . . . . . . . . GSEVTAMLEKGERMG. . . CPAGCPREMYDLMNLCWTYDVEN
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Template Sequence  FNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNK
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S

T


TS






STTS
S
SSTTT
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   293......300.........310.........320.........330.........340.........350..
 
   610.........620......
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Query Sequence  RPGFTAVELRLRNYYYD
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Template Sequence  RITIDQA. . . LDHPYLK
Template Known Secondary structure  S

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GGGT
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   353...... 360......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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