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Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank266Aligned Residues247
% Identity26%Templatec3lltA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine kinase-1, pflammer; PDBTitle: crystal structure of pf14_0431, kinase domain.
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   365....370.........380.........390.........400.........410.........420....
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Query Sequence  TLEDNELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP
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Template Sequence  FLVIRKMGDGTFGRVLLCQHIDNKKY. . YAVKVVR. . . NIKKYTRSAKIEADILKKIQND
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   552.......560.........570....... ..580.... .....590.........600......
 
   425. ...430.........440.........450.... .....460.........470.......
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Query Sequence  YI. . . . . VRMIGICEAESWMLVMEMAELGPLNKYL. . QQNRHIKDKNIIELVHQVSMGMK
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Template Sequence  DINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALN
Template Known Secondary structure  STTGGGB

TT




BTTT



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   607..610.........620.........630.........640.........650.........660......
 
   478.480.........490....... ..500.........510..
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Query Sequence  YLEESNFVHRDLAARNVLLV. . . . . . . . . . . . . . . . . . . . . . . . . TQHYAKISDFGLSKA
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Template Sequence  YLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATF
Template Known Secondary structure  TT
S

SGGGS
TT


TTT

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TT
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   667..670.........680.........690.........700.........710.........720......
 
   513......520.........530.........540.........550.........560.........570..
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Query Sequence  LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG
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Template Sequence  KSDYHGSIINTRQ. . . . . . YRAPEVILNLGWDVSSDMWSFGCVLAELYT. GSLLFRTHEH
Template Known Secondary structure  TTS


S

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GG......G

TT



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   727..730......... 740.........750.........760......... 770.........
 
   573......580. ......
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Query Sequence  SEVTAMLEK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GERMGC
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Template Conservation                                                              
Template Sequence  MEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLY
Template Known Secondary structure  T



TTSGGGGGTTTT
TTTT
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   780.........790.........800.........810.........820.........830.........
 
   588.590.........600.........610.........620......
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Query Sequence  PAGCPREMYDLMNLCWTYDVENRPGFTAVELRLRNYYYD
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Template Sequence  KIIKHELFCDFLYSILQIDPTLRPSPAEL. . . LKHKFLE
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SSGGGS

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   840.........850.........860........ .870.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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