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Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank63Aligned Residues240
% Identity29%Templatec3lijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin dependent protein kinase with PDBTitle: crystal structure of full length cpcdpk3 (cgd5_820) in2 complex with ca2+ and amppnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   362.......370.........380.........390.........400.........410.........420.
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Query Sequence  SLLTLEDNELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL
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Template Sequence  SEMYQRVKKLG. . . SGEVLLCRDKVTHVE. . RAIKIIRKSS. . . . . NSKLLEEVAVLKLL
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   5960......... 70.........80.... .....90.... .....100........
 
   422.......430...... ...440.........450.........460.........470.........480
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Query Sequence  DNPYIVRMIGICEAE. SWMLVMEMAELGPLNKYLQQNRHIKDKNIIELVHQVSMGMKYLE
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Template Sequence  DHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLH
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TTB


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   117..120.........130.........140.........150.........160.........170......
 
   481........490...... ...500.........510.........520.........530.......
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Query Sequence  ESNFVHRDLAARNVLL. . . VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC
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Template Sequence  KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK. . . . MKERLGTAYYIAPEV
Template Known Secondary structure  TT
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SGGGS
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TT

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   177..180.........190.........200.........210....... ..220.........230..
 
   538.540.........550.........560.........570.........580... ......590....
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Query Sequence  INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE. . . RMGCPAGCPRE
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Template Sequence  LR. KKYDEKCDVWSIGVILFILLA. GYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEG
Template Known Secondary structure  T.T
B
T.SS
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SST




SGGGTTS
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   233. .....240.........250..... ....260.........270.........280.........290
 
   595....600.........610.......
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Query Sequence  MYDLMNLCWTYDVENRPGFTAVE
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Template Sequence  AKDLIKQMLQFDSQRRISAQQAL
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   291........300.........310...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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