Return to main results Retrieve Phyre Job Id

Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank157Aligned Residues248
% Identity27%Templatec3ku2A_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of inactivated form of cdpk1 from toxoplasma gondii,2 tgme49.101440
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   362.......370.........380.........390........ .400.........410.........420
Predicted Secondary structure 











.



Query SS confidence 




































.





















Query Sequence  SLLTLEDNELGSGNFGTVKKGYYQMKKVVKTVAVKIL. KNEANDPALKDELLAEANVMQQ
Query Conservation           

 
 

 
             



 
.               
  

  
Alig confidence 




























..





.





















Template Conservation     
     

 
  
 

          .. 


 
                
   
  
Template Sequence  SDRYKGQRVLGKGSFGEVILCKDKITGQE. . CAVKVISKRQVKQKTDKESLLREVQLLKQ
Template Known Secondary structure 
SS
TTT

..TTTS
BSS
Template Predicted Secondary structure 










..


Template SS confidence 



























































   48.50.........60.........70...... ...80.........90.........100.....
 
   421........430...... ...440.........450.........460.........470.........
Predicted Secondary structure 






.











Query SS confidence 















.










































Query Sequence  LDNPYIVRMIGICEAE. SWMLVMEMAELGPLNKYLQQNRHIKDKNIIELVHQVSMGMKYL
Query Conservation 
 
  

   
     .   

 
    


   
                

  

 

Alig confidence 















.










































Template Conservation 
 
 


             

 
      
   
                 
   
  
Template Sequence  LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYM
Template Known Secondary structure 


TTB


SS



S
BTT
S


Template Predicted Secondary structure 





















Template SS confidence 



























































   106...110.........120.........130.........140.........150.........160.....
 
   480.........490...... ...500.........510.........520.........530......
Predicted Secondary structure 











...























Query SS confidence 
















. . .







































Query Sequence  EESNFVHRDLAARNVLL. . . VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE
Query Conservation 
   






  



...      

 




                  
    


Alig confidence 
















...





















....













Template Conservation 
             
                           ....            

Template Sequence  HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK. . . . MKDKIGTAYYIAPE
Template Known Secondary structure  TT


SS

GGGSSSSTT



TTTTTTB



S....TT
TTT

Template Predicted Secondary structure 







































....










Template SS confidence 



























































   166...170.........180.........190.........200....... ..210.........220.
 
   537..540.........550.........560.........570.........580... ......590...
Predicted Secondary structure 

















...








Query SS confidence 














































. . .









Query Sequence  CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE. . . RMGCPAGCPR
Query Conservation            




 

 
 
  
 
  
            
    ...    
   
 
Alig confidence 


.




















.




















...









Template Conservation     .       

 


 

 

  .
  

           
               
 
Template Sequence  VLH. GTYDEKCDVWSTGVILYILLS. GCPPFNGANEYDILKKVEKGKYTFELPQWKKVSE
Template Known Secondary structure  .S


T.SS
SS

SST




SGGGGGS
Template Predicted Secondary structure  .





.






















Template SS confidence 



























































   222.. .....230.........240..... ....250.........260.........270.........
 
   594.....600.........610.......
Predicted Secondary structure 






Query SS confidence 























Query Sequence  EMYDLMNLCWTYDVENRPGFTAVE
Query Conservation      
   
    
  


   
 
Alig confidence 























Template Conservation      

   
   
  
 
  
 
Template Sequence  SAKDLIRKMLTYVPSMRISARDAL
Template Known Secondary structure  T
SSTTTS

Template Predicted Secondary structure 






Template SS confidence 























   280.........290.........300...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D