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Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank146Aligned Residues237
% Identity21%Templatec3kl8C_
PDB info PDB header:transferase/ transferase inhibitorChain: C: PDB Molecule:calcium/calmodulin dependent protein kinase ii; PDBTitle: camkiintide inhibitor complex
Resolution3.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   373......380.........390.........400.........410.........420.........430..
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Query Sequence  SGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI
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Template Sequence  KEELSVVRRCVHKTTGLE. . FAAKIINTD. . . . . . FQKLEREARICRKLQHPNIVRLHDS
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   16...20.........30... ......40.. .......50.........60.......
 
   433... ...440.........450.........460.........470.........480.........490.
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Query Sequence  CEAE. SWMLVMEMAELGPLNKYLQQNRHIKDKNIIELVHQVSMGMKYLEESNFVHRDLAA
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Template Sequence  IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKP
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   7980.........90.........100.........110.........120.........130........
 
   492..... ..500.........510.........520.........530.........540........
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Query Sequence  RNVLLV. . . TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD
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Template Sequence  ENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPG. . . . YLSPEVLKKDPYSKPVD
Template Known Secondary structure  GGS
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   139140.........150.........160.........170....... ..180.........190....
 
   549550.........560.........570.........580......... 590.........600.....
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Query Sequence  VWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA. . . GCPREMYDLMNLCWTY
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Template Sequence  IWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTV
Template Known Secondary structure  .SS
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TTGGGGS
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   195....200....... ..210.........220.........230.........240.........250...
 
   606...610.........620.....
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Query Sequence  DVENRPGFTAVELRLRNYYY
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Template Sequence  NPKKRITADQA. . . LKVPWI
Template Known Secondary structure  SGGGS

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   254.....260.... .....270
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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