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Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank192Aligned Residues238
% Identity26%Templatec3igoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of cryptosporidium parvum cdpk1, cgd3_920
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   365....370.........380.........390.........400.........410.........420....
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Query Sequence  TLEDNELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP
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Template Sequence  YNIVCMLGKGSFGEVLKCKDRITQQE. . YAVKVINKASAKNK. TSTILREVELLKKLDHP
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   76...80.........90.........100. ........110..... ....120.........130..
 
   425....430...... ...440.........450.........460.........470.........480...
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Query Sequence  YIVRMIGICEAE. SWMLVMEMAELGPLNKYLQQNRHIKDKNIIELVHQVSMGMKYLEESN
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Template Sequence  NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN
Template Known Secondary structure  TB


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   134.....140.........150.........160.........170.........180.........190...
 
   484.....490...... ...500.........510.........520.........530.........540
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Query Sequence  FVHRDLAARNVLL. . . VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY
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Template Sequence  IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTT. . . . . . . . . . . . AYYIAPEVLR
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GGGSSSSTT


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............GGG

GGGGG
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   194.....200.........210.........220.........230. ........240.
 
   541........550.........560.........570.........580... ......590.......
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Query Sequence  YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE. . . RMGCPAGCPREMYD
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Template Sequence  GTYDEKCDVWSAGVILYILLS. GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKD
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SGGGGGS
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   249250.........260......... 270.........280.........290.........300.......
 
   598.600.........610........
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Query Sequence  LMNLCWTYDVENRPGFTAVEL
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Template Sequence  LIRKMLTFHPSLRITATQCLE
Template Known Secondary structure  T
SSTTTS

T
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   308.310.........320........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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