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Job DescriptionP48025
Confidence99.96%DateWed Jul 10 14:17:05 BST 2013
Rank327Aligned Residues203
% Identity16%Templatec3en9B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:o-sialoglycoprotein endopeptidase/protein kinase; PDBTitle: structure of the methanococcus jannaschii kae1-bud32 fusion2 protein
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   352.......360.........370.........380.........390.........400........
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Query Sequence  IRPKEVYLDRSLLTLEDNELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK. . .
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Template Sequence  MSLDETKIIPNYRTDMVEVNWIGAEADIKRDSY. . . . LDFDVIIKERVKKGYRDERLDEN
Template Known Secondary structure  B
TGGG


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   303......310.........320.........330..... ....340.........350........
 
   409410.........420.........430... ......440.........450.........460....
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Query Sequence  . . . DELLAEANVMQQLDNPYIVRMIGIC. EAESWMLVMEMAELGPLNKYLQQNRHIKDKN
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Template Sequence  IRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIEDN. . . . . . .
Template Known Secondary structure  GGGTT




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SGGGTTTT
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   376...380.........390.........400.........410.........420........
 
   465....470.........480.........490.........500.........510.........520....
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Query Sequence  IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT
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Template Sequence  . LDIAYKIGEIVGKLHKNDVIHNDLTTSNFIF. . DKDLYIIDFGLGKISNLDED. . . . . .
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   429430.........440.........450......... 460.........470.........
 
   525....530.........540.........550.........560.........570.........580....
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Query Sequence  HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER
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Template Sequence  . . KAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVY. D. . . . . . . RWEIILELMKDVER
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TTT
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   480.........490.........500.........510.... . ....520.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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