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Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank227Aligned Residues226
% Identity26%Templatec3efwA_
PDB info PDB header:transferase/inhibitorChain: A: PDB Molecule:serine/threonine-protein kinase 6; PDBTitle: structure of auroraa with pyridyl-pyrimidine urea inhibitor
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   365....370.........380.........390.........400.. .......410.........420...
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Query Sequence  TLEDNELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA. NDPALKDELLAEANVMQQLDN
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Template Sequence  FEIGRPLGKGKFGNVYLAREKQSKFI. . LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH
Template Known Secondary structure  TTTTT

..T
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   133......140.........150........ .160.........170.........180.........190
 
   424.....430....... ..440.........450.........460.........470.........480..
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Query Sequence  PYIVRMIGICEAES. WMLVMEMAELGPLNKYLQQNRHIKDKNIIELVHQVSMGMKYLEES
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Template Sequence  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK
Template Known Secondary structure  TTB


SS


TT
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TT
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   191........200.........210.........220.........230.........240.........250
 
   483......490.........500.........510.........520.........530.........540..
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Query Sequence  NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK
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Template Sequence  RVIHRDIKPENLLLGSAGELKIADFL. . . . . . . . . . . . . . . . . . . . . . DYLPPEMI. . . .
Template Known Secondary structure  T






GGG
TTS




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GGGT....
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   251........260.........270...... ...280....
 
   543......550.........560.........570.........580.........590.........600..
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Query Sequence  FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLC
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Template Sequence  . . EKVDLWSLGVLCYEFLV. GKPPFEANTYQETYKRISRVE. FTFPDFVTEGARDLISRL
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TT

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   302.......310........ .320.........330......... 340.........350.......
 
   603......610.........620.....
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Query Sequence  WTYDVENRPGFTAVELRLRNYYY
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Template Sequence  LKHNPSQRPMLREV. . . LEHPWI
Template Known Secondary structure  S
SSGGGS

...T
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   364.....370....... ..380...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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