Job Description P48025 Confidence 100.00% Date Wed Jul 10 14:17:05 BST 2013 Rank 203 Aligned Residues 285 % Identity 12% Template c3dzoA_ PDB info PDB header:transferase Chain: A: PDB Molecule:rhoptry kinase domain; PDBTitle: crystal structure of a rhoptry kinase from toxoplasma gondii Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	D	R	G	L	Q	R	E	A	L	P	M	D	T	E	V	Y	E	S	P	Y	A	D	P	E	E	I	R	P	K	E	V	Y	L	D	R	S	L	L	T	L	E	D	N	E	L	G	S	G	N	F	G	T	V	K	K	G	Y	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	Q	A	N	V	R	T	T	S	E	Y	A	A	D	S	L	V	S	T	S	L	W	N	T	G	Q	P	F	R	V	E	S	E	L	G	E	R	P	R	T	L	V	R	G	T	V	L	G	Q	E	D	P	Y	A	Y	L	E	A	T	D
Template Known Secondary structure		G	G	G	G			S	S											T	T	T			T	T								S	S	S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.											.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	M	K	K	V	V	K	T	V	A	V	K	I	L	K	N	E	A	N	D	P	A	L	K	D	E	L	L	A	E	A	N	V	M	Q	Q	L	D	N	P	Y	I	V	R	M	I	G	I	C	.	.	.	.	.	.	.	.	.	.	E
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.																																										.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.
Template Sequence		Q	E	T	G	E	S	.	.	F	E	V	H	V	P	Y	F	T	E	R	A	I	K	Q	M	K	E	E	V	L	R	L	R	L	L	R	G	I	K	N	Q	K	Q	A	K	V	H	L	R	F	I	F	P	F	D	L	V	K	D	P	Q
Template Known Secondary structure		T	T	T				.	.									S													G	G	G	G	S	T	T			S								T		B
Template Predicted Secondary structure								.	.
Template SS confidence
		277	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.								.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.
Query Sequence		A	E	S	W	M	L	V	M	E	M	A	E	L	G	P	L	N	K	Y	L	.	.	.	.	.	.	.	Q	Q	N	R	H	I	K	D	K	N	I	I	E	L	V	H	Q	V	S	M	G	M	K	Y	L	E	E	S	N	F	V	H	R
Query Conservation																						.	.	.	.	.	.	.
Alig confidence													.									.	.	.	.	.	.	.
Template Conservation													.
Template Sequence		V	L	S	R	F	F	L	Y	P	R	M	.	Q	S	N	L	Q	T	F	G	E	V	L	L	S	H	S	S	T	H	K	S	L	V	H	H	A	R	L	Q	L	T	L	Q	V	I	R	L	L	A	S	L	H	H	Y	G	L	V	H	T
Template Known Secondary structure				S									.	S														T	T	T	S																									T	T				S
Template Predicted Secondary structure													.
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.			.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.		.	.
Predicted Secondary structure																																									.	.																	.
Query SS confidence																																									.	.																	.
Query Sequence		D	L	A	A	R	N	V	L	L	V	T	Q	H	Y	A	K	I	S	D	F	G	L	S	K	A	L	R	A	D	E	N	Y	Y	K	A	Q	T	H	G	.	.	K	W	P	V	K	W	Y	A	P	E	C	I	N	Y	Y	K	.	F	S
Query Conservation																																									.	.																	.
Alig confidence																																									.	.																	.
Template Conservation
Template Sequence		Y	L	R	P	V	D	I	V	L	D	Q	R	G	G	V	F	L	T	G	F	E	H	L	V	R	D	G	A	S	A	V	S	P	I	G	R	G	F	A	P	P	E	T	T	A	E	R	M	L	P	F	G	Q	H	H	P	T	L	M	T
Template Known Secondary structure					G	G	G					T	T								G	G	G				T	T									T	T	T										T	S	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
		545	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	S	D	V	W	S	F	G	V	L	M	W	E	A	F	S	Y	G	Q	K	P	Y	R	G	M	K	G	S	E	V	T	A	M	L	E	K	G	E	R	M	G	C	P	A	G	C	P	R	E	M	Y	D	L	M	N	L	C	W	T
Query Conservation
Alig confidence																			.																		.	.	.	.	.
Template Conservation																			.																		.	.	.	.	.
Template Sequence		F	A	F	D	T	W	T	L	G	L	A	I	Y	W	I	W	C	.	A	D	L	P	N	T	D	D	A	A	L	G	G	S	E	W	I	.	.	.	.	.	F	R	S	C	K	N	I	P	Q	P	V	R	A	L	L	E	G	F	L	R
Template Known Secondary structure																			.	S	S					T	T	G	G	G	S		S	G	G	G	.	.	.	.	.	G	S	S																T
Template Predicted Secondary structure																			.																		.	.	.	.	.
Template SS confidence
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.						.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
		605	.	.	.	.	610	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	V	E	N	R	P	G	F	T	A	V	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	P	K	E	D	R	L	L	P	L	Q	A	M	E
Template Known Secondary structure		S	S	G	G	G	S							T	T
Template Predicted Secondary structure
Template SS confidence
		527	.	.	530	.	.	.	.	.	.	.	.	.	540

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D