Return to main results Retrieve Phyre Job Id

Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank225Aligned Residues225
% Identity24%Templatec3db8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:polo-like kinase 1; PDBTitle: crystal structure of an activated (thr->asp) polo-like2 kinase 1 (plk1) catalytic domain in complex with compound3 041
Resolution3.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   365....370.........380.........390.........400.. .......410.........420...
Predicted Secondary structure 













.




Query SS confidence 





































.




















Query Sequence  TLEDNELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA. NDPALKDELLAEANVMQQLDN
Query Conservation        

 
 

 
             



 
    .           
  

  
 
Alig confidence 

























..









.




















Template Conservation 
 
   

 
 

 
  
    

  ..



 
                

 

  
 
Template Sequence  YMRGRFLGKGGFAKCYEITDMDTKEV. . FAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN
Template Known Secondary structure  TTTTT

..TTTT
STT


Template Predicted Secondary structure 






..




Template SS confidence 



























































   3940.........50.........60.... .....70.........80.........90......
 
   424.....430....... ..440.........450.........460.........470.........480..
Predicted Secondary structure 




.











Query SS confidence 













.












































Query Sequence  PYIVRMIGICEAES. WMLVMEMAELGPLNKYLQQNRHIKDKNIIELVHQVSMGMKYLEES
Query Conservation    

   
      .  

 
    


   
                

  

 


  
Alig confidence 













.












































Template Conservation    
                                                         
Template Sequence  PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN
Template Known Secondary structure  TTB


SS


TT
BSS

T
Template Predicted Secondary structure 





























Template SS confidence 



























































   97..100.........110.........120.........130.........140.........150......
 
   483......490.........500.........510.........520.........530.........540..
Predicted Secondary structure 





































Query SS confidence 



























































Query Sequence  NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK
Query Conservation   






  



      

 




                  
    


      
Alig confidence 






























.............................
Template Conservation             
        

 

      .............................
Template Sequence  RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T




GGG
TT




TT

.............................
Template Predicted Secondary structure 




















.............................
Template SS confidence 



























































   157..160.........170.........180.......
 
   543......550.........560.........570.........580.........590.........600..
Predicted Secondary structure 























Query SS confidence 



























































Query Sequence  FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLC
Query Conservation      




 

 
 
  
 
  
            
        
   
     
   
Alig confidence 


















.




















.

















Template Conservation       





 

 

  .
  

           
    .       
    


   
Template Sequence  HSFEVDIWSLGCILYTLLV. GKPPFETSCLKETYIRIKKNE. YSVPRHINPVASALIRRM
Template Known Secondary structure 

T.SS
TT

SSTT
.



TTS
Template Predicted Secondary structure 



.










.







Template SS confidence 



























































   214.....220.........230.. .......240.........250... ......260.........270.
 
   603......610.........620.....
Predicted Secondary structure 






Query SS confidence 






















Query Sequence  WTYDVENRPGFTAVELRLRNYYY
Query Conservation      
  


   
   
     
Alig confidence 













...





Template Conservation 
  

  
 
  

...
 

 
Template Sequence  LHADPTLRPSVAEL. . . LTDEFF
Template Known Secondary structure  T
SSGGGS

...TS
Template Predicted Secondary structure 






...

Template SS confidence 






















   272.......280..... ....290.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D