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Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank75Aligned Residues258
% Identity21%Templatec3d9vA_
PDB info PDB header:transferaseChain: A: PDB Molecule:rho-associated protein kinase 1; PDBTitle: crystal structure of rock i bound to h-1152p a di-2 methylated variant of fasudil
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   365....370.........380.........390........ .400.........410.........420...
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Query Sequence  TLEDNELGSGNFGTVKKGYYQMKKVVKTVAVKIL. KNEANDPALKDELLAEANVMQQLDN
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Template Sequence  YEVVKVIGRGAFGEVQLVRHKSTRKV. . YAMKLLSKFEMIKRSDSAFFWEERDIMAFANS
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   76...80.........90.........100. ........110.........120.........130...
 
   424.....430...... ...440.........450.........460.........470.........480..
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Query Sequence  PYIVRMIGICEAE. SWMLVMEMAELGPLNKYLQQNRHIKDKNIIELVHQVSMGMKYLEES
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Template Sequence  PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM. SNYDVPEKWARFYTAEVVLALDAIHSM
Template Known Secondary structure  TTB


SS


TT.S


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   134.....140.........150.........160..... ....170.........180.........190..
 
   483......490.........500.........510.........520.........530........
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Query Sequence  NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI. . . .
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Template Sequence  GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD. . YISPEVLKSQG
Template Known Secondary structure  T




GGG
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SS

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TT..T

T

T
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   193......200.........210.........220.........230......... 240.........250
 
   539540.........550.........560.........570.........580.. .......590.....
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Query Sequence  NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG. . . ERMGCPAGCPREM
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Template Sequence  GDGYYGRECDWWSVGVFLYEMLV. GDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEA
Template Known Secondary structure  T


T.SS
TT

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   251........260.........270... ......280.........290.........300.........
 
   596...600.........610.........620.........
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Query Sequence  YDLMNLCWTYDVENRPGFTAVELRLRNYYYDVVN
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Template Sequence  KNLICAFLT. DREVRLGRNGVEEIKRHLFFKNDQ
Template Known Secondary structure  SS.
TTT
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   310........ .320.........330.........340..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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