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Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank210Aligned Residues214
% Identity27%Templatec3cokB_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine/threonine-protein kinase plk4; PDBTitle: crystal structure of plk4 kinase
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   365....370.........380.........390........ .400.........410.........420...
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Query Sequence  TLEDNELGSGNFGTVKKGYYQMKKVVKTVAVKIL. KNEANDPALKDELLAEANVMQQLDN
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Template Sequence  FKVGNLLGKGSFAGVYRAESIHTGLE. . VAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH
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   11........20.........30...... ...40.........50.........60........
 
   424.....430....... ..440.........450....... ..460.........470.........480.
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Query Sequence  PYIVRMIGICEAES. WMLVMEMAELGPLNKYLQQN. RHIKDKNIIELVHQVSMGMKYLEE
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Template Sequence  PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS
Template Known Secondary structure  TTB


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   6970.........80.........90.........100.........110.........120........
 
   482.......490.........500.........510.........520.........530.........540.
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Query Sequence  SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY
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Template Sequence  HGILHRDLTLSNLLLTRNMNIKIADFGLATQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT
S


GGG
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   129130.........140.........150.........
 
   542.......550.........560.........570.........580.........590.........600.
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Query Sequence  KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNL
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Template Sequence  . LKLESDVWSLGCMFYTLLI. GRPPFNTLNK. . . . . . . VVLADYEMPSFLSIEAKDLIHQ
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   160.........170........ .180........ .190.........200.........210
 
   602.......610........
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Query Sequence  CWTYDVENRPGFTAVEL
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Template Sequence  LLRRNPADRLSLSSVLD
Template Known Secondary structure  S
SSGGGS

TT
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   244.....250.........260
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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