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Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank124Aligned Residues256
% Identity22%Templatec2vrxB_
PDB info PDB header:cell cycle/transferaseChain: B: PDB Molecule:serine/threonine-protein kinase 12-a; PDBTitle: structure of aurora b kinase in complex with zm447439
Resolution1.86 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   358.360.........370.........380.........390.........400.. .......410......
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Query Sequence  YLDRSLLTLEDNELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA. NDPALKDELLAEAN
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Template Sequence  EMPKRKFTIDDFDIGRPLGGNVYLAREKQNK. . FIMALKVLFKSQLEKEGVEHQLRREIE
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   82.......90.........100.........110.. .......120.........130.........
 
   417..420.........430....... ..440.........450.........460.........470.....
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Query Sequence  VMQQLDNPYIVRMIGICEAES. WMLVMEMAELGPLNKYLQQNRHIKDKNIIELVHQVSMG
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Template Sequence  IQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADA
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   144.....150.........160.........170.........180.........190.........200...
 
   476...480.........490.........500.........510.........520.........530.....
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Query Sequence  MKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP
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Template Sequence  LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR. . . . . . RRMCGTLDYLPP
Template Known Secondary structure  TT



SGGG
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   204.....210.........220.........230.........240..... ....250.......
 
   536...540.........550.........560.........570.........580.........590.....
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Query Sequence  ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREM
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Template Sequence  EMIEGKTHDEKVDLWCAGVLCYEFLV. GMPPFDSPSHTETHRRIVNV. DLKFPPFLSDGS
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B
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   259260.........270.........280.... .....290.........300.... .....310......
 
   596...600.........610.........620......
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Query Sequence  YDLMNLCWTYDVENRPGFTAVELRLRNYYYD
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Template Sequence  KDLISKLLRYHPPQRLPLKGV. . . MEHPWVK
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   317..320.........330....... ..340....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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