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Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank259Aligned Residues246
% Identity25%Templatec2qkwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase; PDBTitle: structural basis for activation of plant immunity by2 bacterial effector protein avrpto
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   369370.........380.........390.........400.........410.........420........
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Query Sequence  NELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR
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Template Sequence  FLIGHGVFGKVYKGVLR. . . DGAKVALKRRTPE. . SSQGIEEFETEIETLSFCRHPHLVS
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   45....50.........60. ........70.... .....80.........90.........
 
   429430...... ...440.........450.... .....460.........470.........480...
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Query Sequence  MIGICEAE. SWMLVMEMAELGPLNKYL. . . . QQNRHIKDKNIIELVHQVSMGMKYLEESN
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Template Sequence  LIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA
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   100.........110.........120.........130.........140.........150.........
 
   484.....490.........500.........510.........520.........530.........540...
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Query Sequence  FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF
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Template Sequence  IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLVVKGTLG. . . YIDPEYFIKGRL
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   160.........170.........180.........190.........200.... .....210......
 
   544.....550.........560.........570.........580. ......
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Query Sequence  SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK. . . . . . . . . . . . . . . . GERMGC
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Template Sequence  TEKSDVYSFGVVLFEVLC. ARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKI
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   219220.........230...... ...240.........250.........260.........270.......
 
   588.590.........600.........610.........620...
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Query Sequence  PAGCPREMYDLMNLCWTYDVENRPGFTAVELRLRNY
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Template Sequence  RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA
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   278.280.........290.........300.........310...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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