Job Description P48025 Confidence 100.00% Date Wed Jul 10 14:17:05 BST 2013 Rank 89 Aligned Residues 301 % Identity 16% Template c2pziA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable serine/threonine-protein kinase pkng; PDBTitle: crystal structure of protein kinase pkng from mycobacterium2 tuberculosis in complex with tetrahydrobenzothiophene ax20017 Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	A	P	P	Q	G	S	R	P	E	S	T	V	S	F	N	P	Y	E	P	T	G	G	P	W	G	P	D	R	G	L	Q	R	E	A	L	P	M	D	T	E	V	Y	E	S	P	Y	A	D	P	E	E	I	R	P	K	E	V	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	P	D	I	D	P	L	E	A	L	M	T	N	P	V	V	P	E	S	K	R	F	C	W	N	C	G	R	P	V	G	R	S	G	A	S	E	G	W	C	P	Y	C	G	S	P	Y	S	F	L	P	Q	L	N	P	G	D	I	V
Template Known Secondary structure														S	S					G	G	G		B		T	T	T			B		S					S					T	T	T							S		S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	R	S	L	L	T	L	E	D	N	E	L	G	S	G	N	F	G	T	V	K	K	G	Y	Y	Q	M	K	K	V	V	K	T	V	A	V	K	I	L	K	N	E	A	N	D	P	A	L	K	D	E	L	L	A	E	A	N	V	M
Query Conservation
Alig confidence											.	.	.																		.														.
Template Conservation											.	.	.																		.														.
Template Sequence		A	G	Q	Y	E	V	K	G	C	.	.	.	I	A	H	G	G	L	G	W	I	Y	L	A	L	D	R	N	V	.	N	G	R	P	V	V	L	K	G	L	V	H	S	.	G	D	A	E	A	Q	A	M	A	M	A	E	R	Q	F	L
Template Known Secondary structure		T	T	T							.	.	.					T	T									G	G	G	.	T	T								S		S	S	.														G	G	G
Template Predicted Secondary structure											.	.	.																		.														.
Template SS confidence
		148	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.							.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure																					.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.
Query Sequence		Q	Q	L	D	N	P	Y	I	V	R	M	I	G	I	C	E	A	E	S	.	.	.	.	.	.	W	M	L	V	M	E	M	A	E	L	G	P	L	N	K	Y	L	Q	Q	N	R	H	I	K	D	K	N	I	I	E	L	V	H	Q	V
Query Conservation																					.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.														.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.
Template Sequence		A	E	V	V	H	P	S	I	V	Q	I	F	N	F	V	E	H	T	D	R	H	G	D	P	V	G	Y	I	V	M	E	Y	V	G	G	Q	S	L	.	.	.	.	.	.	K	Q	K	L	P	V	A	E	A	I	A	Y	L	L	E	I
Template Known Secondary structure		G	G				T	T	B												T	T	S																	.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240							.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	G	M	K	Y	L	E	E	S	N	F	V	H	R	D	L	A	A	R	N	V	L	L	V	T	Q	H	Y	A	K	I	S	D	F	G	L	S	K	A	L	R	A	D	E	N	Y	Y	K	A	Q	T	H	G	K	W	P	V	K	W
Query Conservation
Alig confidence																											.																						.	.	.	.	.	.	.
Template Conservation																											.																						.	.	.	.	.	.	.
Template Sequence		L	P	A	L	S	Y	L	H	S	I	G	L	V	Y	N	D	L	K	P	E	N	I	M	L	T	.	E	E	Q	L	K	L	I	D	L	G	A	V	S	R	I	N	S	F	G	Y	L	.	.	.	.	.	.	.	Y	G	T	P	G	F
Template Known Secondary structure											T	T							S	G	G	G					.	S	S								T	T				T	T			S			.	.	.	.	.	.	.				T	T	T
Template Predicted Secondary structure																											.																						.	.	.	.	.	.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.		.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.								.	.	.	310	.	.
		533	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	P	E	C	I	N	Y	Y	K	F	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	A	F	S	Y	G	Q	K	P	Y	R	G	M	K	G	S	E	V	T	A	M	L	E	K	G	E	R	M	G	C	P	A	G	C	P
Query Conservation
Alig confidence												.																			.														.	.	.	.	.	.	.
Template Conservation												.																			.														.	.	.	.	.	.	.
Template Sequence		Q	A	P	E	I	V	R	T	G	P	.	T	V	A	T	D	I	Y	T	V	G	R	T	L	A	A	L	T	L	.	D	L	P	T	R	N	G	R	Y	V	D	G	L	.	.	.	.	.	.	.	P	E	D	D	P	V	L	K	T	Y
Template Known Secondary structure		S		T	T						S	.																		S	.						T	T				S	S		.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure												.																			.														.	.	.	.	.	.	.
Template SS confidence
		313	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340		.	.	.	.	.	.	.	.	.	350	.	.	.								.	.	.	.	.	.	360	.	.	.
		593	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610		.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		R	E	M	Y	D	L	M	N	L	C	W	T	Y	D	V	E	N	R	.	P	G	F	T	A	V	E	L	R	L	R	N	Y	Y	Y	D	V
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		D	S	Y	G	R	L	L	R	R	A	I	D	P	D	P	R	Q	R	F	T	T	A	E	E	M	S	A	Q	L	T	G	V	L	R	E	V
Template Known Secondary structure												T		S	S	G	G	G	S		S	S
Template Predicted Secondary structure
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D