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Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank252Aligned Residues254
% Identity20%Templatec2pmoX_
PDB info PDB header:transferaseChain: X: PDB Molecule:ser/thr protein kinase; PDBTitle: crystal structure of pfpk7 in complex with hymenialdisine
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   365....370.........380.........390.........400....... ..
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Query Sequence  TLEDNELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL. . . . . . . . . . . . . . . KD
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Template Sequence  YRIIRTLNQGKFNKIILCEK. . . . DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYD
Template Known Secondary structure 
SS
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   28.30.........40....... ..50.........60.........70.........80...
 
   410.........420.........430....... ..440.........450..... ....460
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Query Sequence  ELLAEANVMQQLDNPYIVRMIGICEAES. WMLVMEMAELGPLNKYLQ. . . . . . . . QNRHI
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Template Sequence  DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI
Template Known Secondary structure  TT


SSB


SSSS

TT
BSSSSSSS
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   84.....90.........100.........110.........120.........130.........140...
 
   461........470.........480. ........490.........500.........510.........
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Query Sequence  KDKNIIELVHQVSMGMKYLEE. SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY
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Template Sequence  PIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYM. . . VDK
Template Known Secondary structure 
TT

S


GGG
SS




TT

...BTT
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   144.....150.........160.........170.........180.........190....... ..200
 
   520.........530.........540.........550.........560......... 570........
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Query Sequence  YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG. MKGSEVTAM
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Template Sequence  KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFY. NVVPFSLKISLVELFNN
Template Known Secondary structure 
S
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GGG

GGGGSS
S.SS
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   201........210.........220.........230.........240.. .......250.........
 
   579580..... ....590.........600.........610.........620........
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Query Sequence  LEKGERM. . . . . . . . . . GCPAGCPREMYDLMNLCWTYDVENRPGFTAVELRLRNYYYDVV
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Template Sequence  IRTKNIEYPLDRNHFLYPLTNFLSNEDIDFLKLFLRKNPAERITSEDA. . . LKHEWLADT
Template Known Secondary structure  TTT






GGGTTSTTT




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SSTTTS

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   260.........270.........280.........290.........300....... ..310......
 
   629
Predicted Secondary structure 
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Query Sequence  N
Query Conservation   
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Template Conservation   
Template Sequence  N
Template Known Secondary structure 
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   325
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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