Job Description P48025 Confidence 99.86% Date Wed Jul 10 14:17:05 BST 2013 Rank 396 Aligned Residues 97 % Identity 21% Template c2izvA_ PDB info PDB header:transcription Chain: A: PDB Molecule:suppressor of cytokine signaling 4; PDBTitle: crystal structure of socs-4 in complex with elongin-b and2 elongin-c at 2.55a resolution Resolution 2.55 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	F	F	G	N	I	T	R	E	E	A	E	D	Y	L	V	Q	G	G	M	T	D	G	L	Y	L	L	R	Q	S	R	N	Y	L	G	G	F	A	L	S	V	A	H	N	R	K	A	H	H	Y	T	I	E	R	E	L	N	G	T
Query Conservation
Alig confidence																					.	.																																				.
Template Conservation																					.	.																																				.
Template Sequence		P	C	Y	W	G	V	M	D	K	Y	A	A	E	A	L	L	E	G	K	.	.	P	E	G	T	F	L	L	R	D	S	A	Q	E	D	Y	L	F	S	V	S	F	R	R	Y	S	R	S	L	H	A	R	I	E	Q	W	.	N	H	N
Template Known Secondary structure		T	T															T	T		.	.		T	T								S	S	T	T		S								T	T											.	T	T
Template Predicted Secondary structure																					.	.																																				.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.			.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.		.	340	.
		73	.	.	.	.	.	.					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure									.	.	.	.																							.	.
Query SS confidence									.	.	.	.																							.	.
Query Sequence		Y	A	I	S	G	G	R	.	.	.	.	A	H	A	S	P	A	D	L	C	H	Y	H	S	Q	E	P	D	G	L	I	C	L	.	.	L	K	K	P	F	N	R	P	P	G	V
Query Conservation									.	.	.	.																							.	.
Alig confidence									.	.	.	.																							.	.
Template Conservation
Template Sequence		F	S	F	D	A	H	D	P	C	V	F	H	S	P	D	I	T	G	L	L	E	H	Y	K	D	P	S	A	C	M	F	F	E	P	L	L	S	T	P	L	I	R	T	F	P	F
Template Known Secondary structure				S		T	T		T	T	S			B	S	S								T			G	G	G			T	T	S											S
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D