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Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank6Aligned Residues372
% Identity35%Templatec2h8hA_
PDB info PDB header:transferaseChain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase src; PDBTitle: src kinase in complex with a quinazoline inhibitor
Resolution2.20 Å
Model Dimensions (Å)X:61.091 Y:76.395 Z:55.470

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   163......170.........180.........190...... ...200.........210. .....
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Query Sequence  EKMPWFHGNISRDESEQTVLIGSKTNGKFLIRAR. DNSGSYALCLLHEGK. . . . . VLHYR
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Template Sequence  QAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYK
Template Known Secondary structure  GGSTTB

S

T
TT

TT
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   144.....150.........160.........170.........180.........190.........200...
 
   217..220.........230.........240.........250.........260.........270......
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Query Sequence  IDRDKTGKLSIPEGKKFDTLWQLVEHYSYKPDGLLRVLTVPCQKIGAQMGHPGSPNAHPV
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Template Sequence  IRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGLCHRLTTVC. . . . . . . . . . . . . . . . . .
Template Known Secondary structure  B
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   204.....210.........220.........230.........240.....
 
   277..280.........290.........300.........310.........320.........330......
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Query Sequence  TWSPGGIISRIKSYSFPKPGHKKPAPPQGSRPESTVSFNPYEPTGGPWGPDRGLQREALP
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   337..340.........350.........360.........370.........380.........390......
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Query Sequence  MDTEVYESPYADPEEIRPKEVYLDRSLLTLEDNELGSGNFGTVKKGYYQMKKVVKTVAVK
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Template Sequence  . . . . . . PTSKPQTQGLAKDAWEIPRESLRL. EVKLGQGCFGEVWMGTWN. . . GTTRVAIK
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SSSSTT
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   246...250.........260......... 270.........280....... ..290.....
 
   397..400.........410.........420.........430.........440.........450....
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Query Sequence  ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL. .
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Template Sequence  TLKPGTMS. . . PEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKG
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   296...300... ......310.........320.........330.........340.........350..
 
   455....460.........470.........480.........490.........500.........510....
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Query Sequence  QQNRHIKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR
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Template Sequence  ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI.
Template Known Secondary structure  TT

TT


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SGGG
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   353......360.........370.........380.........390.........400.........410.
 
   515....520.........530.........540.........550.........560.........570....
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Query Sequence  ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE
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Template Sequence  . EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE
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   412.......420.........430.........440.........450.........460.........470
 
   575....580.........590.........600.........610.........620.......
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Query Sequence  VTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFTAVELRLRNYYYDV
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Template Sequence  VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST
Template Known Secondary structure  TT





TT

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   471........480.........490.........500.........510.........520...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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