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Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank202Aligned Residues232
% Identity22%Templatec2bvaA_
PDB info PDB header:transferaseChain: A: PDB Molecule:p21-activated kinase 4; PDBTitle: crystal structure of the human p21-activated kinase 4
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   372.......380.........390.........400.........410.........420.........430.
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Query Sequence  GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIG
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Template Sequence  NFIKIGIVCIA. . TVRSSGKLVAVKKMDL. . . . . . . . . . LFNEVVIMRDYQHENVVEMYN
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   323......330... ......340......... 350.........360.........370
 
   432.... ...440.........450.........460.........470.........480.........490
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Query Sequence  ICEAE. SWMLVMEMAELGPLNKYLQQNRHIKDKNIIELVHQVSMGMKYLEESNFVHRDLA
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Template Sequence  SYLVGDELWVVMEFLEGGALTDIV. THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK
Template Known Secondary structure  SSS




S
BT.TTS


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   384.....390.........400....... ..410.........420.........430.........440..
 
   491........500.........510.........520.........530.........540.........550
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Query Sequence  ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW
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Template Sequence  SDSILLTHDGRVKLSDFGFCAQVEVPRRKLVGTPY. . . . . . WMAPELISRLPYGPEVDIW
Template Known Secondary structure  GGG
TTS



TT

B




B


S
GG......G

TT

B
T
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   443......450.........460.........470....... ..480.........490......
 
   551........560.........570.........580....... ..590.........600........
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Query Sequence  SFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGC. . PAGCPREMYDLMNLCWTYDVE
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Template Sequence  SLGIMVIEMVD. GEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPA
Template Known Secondary structure  T.SS
TTTTS
TS




S

TT



SSGG
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   500.........510 .........520.........530.........540.........550........
 
   609610.........620......
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Query Sequence  NRPGFTAVELRLRNYYYD
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Template Sequence  QRATAAEL. . . LKHPFLA
Template Known Secondary structure  GS

...TT
GGGG
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   559560...... ...570...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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