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Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank72Aligned Residues238
% Identity25%Templatec2bmcD_
PDB info PDB header:transferaseChain: D: PDB Molecule:serine threonine-protein kinase 6; PDBTitle: aurora-2 t287d t288d complexed with pha-680632
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   365....370.........380.........390.........400... ......410.........420...
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Query Sequence  TLEDNELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN. DPALKDELLAEANVMQQLDN
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Template Sequence  FEIGRPLGKGKFGNVYLAREKQSKFI. . LALKVLFKAQLEKAGVEHQLRREVEIQSHLRH
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SSTTT

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   133......140.........150........ .160.........170.........180.........190
 
   424.....430....... ..440.........450.........460.........470.........480..
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Query Sequence  PYIVRMIGICEAES. WMLVMEMAELGPLNKYLQQNRHIKDKNIIELVHQVSMGMKYLEES
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Template Sequence  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK
Template Known Secondary structure  TTB


SS


TT
BSS

TT
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   191........200.........210.........220.........230.........240.........250
 
   483......490.........500.........510.........520.........530.........540..
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Query Sequence  NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK
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Template Sequence  RVIHRDIKPENLLLGSAGELKIADFGWSV. . . . . . . . . . . . . . . . . TLDYLPPEMIEGRM
Template Known Secondary structure  T




GGG
TTS

S


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GGG

GGGTTTTS
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   251........260.........270......... 280.........290...
 
   543......550.........560.........570.........580.........590.........600..
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Query Sequence  FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLC
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Template Sequence  HDEKVDLWSLGVLCYEFLV. GKPPFEANTYQETYKRISRVE. FTFPDFVTEGARDLISRL
Template Known Secondary structure  SGGG.SS
TT

SSTT
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   306...310.........320.... .....330.........340..... ....350.........360...
 
   603......610.........620......
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Query Sequence  WTYDVENRPGFTAVELRLRNYYYD
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Template Sequence  LKHNPSQRPMLREV. . . LEHPWIT
Template Known Secondary structure  S
SSGGGS

...T
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   364.....370....... ..380....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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