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Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank18Aligned Residues255
% Identity21%Templatec2acxB_
PDB info PDB header:transferaseChain: B: PDB Molecule:g protein-coupled receptor kinase 6; PDBTitle: crystal structure of g protein coupled receptor kinase 6 bound to2 amppnp
Resolution2.60 Å
Model Dimensions (Å)X:59.923 Y:55.183 Z:48.347

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TLEDNELGSGNFGTVKKGYYQMKKVVKTVAVKIL. KNEANDPALKDELLAEANVMQQLDN
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Template Sequence  FRQYRVLGKGGFGEVCACQVRATGKM. . YACKKLEKKRIKKRKGEAMALNEKQILEKVNS
Template Known Secondary structure  TTTTT

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   186...190.........200.........210. ........220.........230.........240...
 
   424.....430...... ...440.........450.........460.........470.........480..
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Query Sequence  PYIVRMIGICEAE. SWMLVMEMAELGPLNKYLQQNRHIKDKNIIELVHQVSMGMKYLEES
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Template Sequence  RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMAGFPEARAVFYAAEICCGLEDLHRE
Template Known Secondary structure  TTB


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   244.....250.........260.........270.........280.........290.........300...
 
   483......490.........500.........510.........520.........530.........540..
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Query Sequence  NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK
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Template Sequence  RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT. . . . IKGRVGTVGYMAPEVVKNER
Template Known Secondary structure  T



SGGG
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GGG

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   306...310.........320.........330.........340. ........350.........360.
 
   543......550.........560.........570.........580.........590.........600..
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Query Sequence  FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLC
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Template Sequence  YTFSPDWWALGCLLYEMIA. GQSPFQQKIKREEVERLVKEVPEEYSERFSPQARSLCSQL
Template Known Secondary structure  SS.SS
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   362.......370.........380 .........390.........400.........410.........420
 
   603......610 .........620.........
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Query Sequence  WTYDVENR. . . . . PGFTAVELRLRNYYYDVVN
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Template Sequence  LCKDPAERLGCRGGSAREV. . . KEHPLFKKLN
Template Known Secondary structure  S
SSGGGSTTSSSST...TSGGGTT

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   424.....430.........440.. .......450..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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