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Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank256Aligned Residues242
% Identity19%Templatec2ac5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:map kinase-interacting serine/threonine kinase 2; PDBTitle: structure of human mnk2 kinase domain mutant d228g
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   362.......370.........380.........390.........400.........410.........420.
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Query Sequence  SLLTLEDNELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL
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Template Sequence  DVYQLQEDVLGEGAHARVQTCINLITSQE. . YAVKIIEKQPGHI. . RSRVFREVEMLYQC
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   81........90.........100......... 110.........120.. .......130......
 
   422.......430....... ..440.........450.........460.........470.........
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Query Sequence  . DNPYIVRMIGICEAES. WMLVMEMAELGPLNKYLQQNRHIKDKNIIELVHQVSMGMKYL
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Template Sequence  QGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFL
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   137..140.........150.........160.........170.........180.........190......
 
   480.........490.........500.........510.........520.........530.........
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Query Sequence  EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN
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Template Sequence  HNKGIAHRDLKPENILCEHPNQVSPVKICDFG. . . . . . . . . PCGSAEYMAPEVVEAFSEE
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   197..200.........210.........220........ .230.........240.......
 
   540.........550.........560.........570. ........580........
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Query Sequence  YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK. . . . . . . . . . . GSEVTAMLEKGERMGCP
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Template Sequence  ASIYDKRCDLWSLGVILYILLS. GYPPFVGRCGSDCGWACPACQNMLFESIQEGK. YEFP
Template Known Secondary structure  TTTT.SS
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   269270.........280.........290 .........300.........310.........320.. ....
 
   589590 .........600.........610........
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Query Sequence  AG. . . . CPREMYDLMNLCWTYDVENRPGFTAVEL
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Template Sequence  DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ
Template Known Secondary structure  TTS
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   331........340.........350.........360....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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