Job Description P48025 Confidence 100.00% Date Wed Jul 10 14:17:05 BST 2013 Rank 239 Aligned Residues 261 % Identity 21% Template c1vzoA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal protein s6 kinase alpha 5; PDBTitle: the structure of the n-terminal kinase domain of msk12 reveals a novel autoinhibitory conformation for a dual3 kinase protein Resolution 1.8 Å

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		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.		.	.	.	390	.	.	.	.	.	.	.	.	.	400	.			.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.		.	420
Predicted Secondary structure																								.																.	.																		.
Query SS confidence																								.																.	.																		.
Query Sequence		T	L	E	D	N	E	L	G	S	G	N	F	G	T	V	K	K	G	Y	Y	Q	M	.	K	K	V	V	K	T	V	A	V	K	I	L	K	N	E	.	.	A	N	D	P	A	L	K	D	E	L	L	A	E	A	N	V	M	.	Q	Q
Query Conservation																								.																.	.																		.
Alig confidence																								.																.	.																		.
Template Conservation
Template Sequence		F	E	L	L	K	V	L	G	T	G	A	Y	G	K	V	F	L	V	R	K	I	S	G	H	D	T	G	K	L	Y	A	M	K	V	L	K	K	A	T	I	V	Q	K	A	K	T	T	E	H	T	R	T	E	R	Q	V	L	E	H	I
Template Known Secondary structure											T	T	T										S	S	T	T	T	T									S									S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		421	.	.	.	.	.	.	.	.	430	.	.	.		.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		L	D	N	P	Y	I	V	R	M	I	G	I	C	.	E	A	E	S	W	M	L	V	M	E	M	A	E	L	G	P	L	N	K	Y	L	Q	Q	N	R	H	I	K	D	K	N	I	I	E	L	V	H	Q	V	S	M	G	M	K	Y	L
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		R	Q	S	P	F	L	V	T	L	H	Y	A	F	Q	T	E	T	K	L	H	L	I	L	D	Y	I	N	G	G	E	L	F	T	H	L	S	Q	R	E	R	F	T	E	H	E	V	Q	I	Y	V	G	E	I	V	L	A	L	E	H	L
Template Known Secondary structure			T		T	T	B										T	T											S		B									S
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	S	N	F	V	H	R	D	L	A	A	R	N	V	L	L	V	T	Q	H	Y	A	K	I	S	D	F	G	L	S	K	A	L	R	A	D	E	N	Y	Y	K	A	Q	T	H	G	K	W	P	V	K	W	Y	A	P	E	C	I	N
Query Conservation
Alig confidence																																																			.	.	.
Template Conservation																																																			.	.	.
Template Sequence		H	K	L	G	I	I	Y	R	D	I	K	L	E	N	I	L	L	D	S	N	G	H	V	V	L	T	D	F	G	L	S	K	E	F	V	A	D	E	T	E	R	A	Y	D	F	C	G	T	I	.	.	.	E	Y	M	A	P	D	I	V
Template Known Secondary structure				T	T								G	G	G					T	T	S					S		S	S							G	G	G	G	G	G	G		G	G	G	S			.	.	.	T	T
Template Predicted Secondary structure																																																			.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.				.	.	.	.	.	.	.	590	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.
Query SS confidence																																													.	.	.
Query Sequence		Y	Y	K	F	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	A	F	S	Y	G	Q	K	P	Y	R	G	M	K	G	S	E	V	T	A	M	L	E	K	G	.	.	.	E	R	M	G	C	P	A	G	C	P	R	E	M	Y
Query Conservation																																													.	.	.
Alig confidence																								.																					.	.	.
Template Conservation																								.
Template Sequence		R	G	G	D	D	K	A	V	D	W	W	S	L	G	V	L	M	Y	E	L	L	T	.	G	A	S	P	F	T	V	D	G	E	K	N	S	Q	A	E	I	S	R	R	I	L	K	S	E	P	P	Y	P	Q	E	M	S	A	L	A	K
Template Known Secondary structure		T	T				T																	.	S	S		T	T	S		T	T	S																				T	T	S
Template Predicted Secondary structure																								.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		597	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.			.	.	.	.	.	620	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		D	L	M	N	L	C	W	T	Y	D	V	E	N	R	P	G	F	T	.	.	A	V	E	L	R	L	R	N	Y	Y	Y	D	V	V	N
Query Conservation																				.	.
Alig confidence																				.	.
Template Conservation
Template Sequence		D	L	I	Q	R	L	L	M	K	D	P	K	K	R	L	G	C	G	P	R	D	A	D	E	I	K	E	H	L	F	F	Q	K	I	N
Template Known Secondary structure								T		S	S	G	G	G	S	T	T	S	S	T	T	T						T	S	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D