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Job DescriptionP29351
Confidence100.00%DateWed Jul 10 14:09:17 BST 2013
Rank23Aligned Residues277
% Identity40%Templated1rpma_
SCOP info(Phosphotyrosine protein) phosphatases II (Phosphotyrosine protein) phosphatases II Higher-molecular-weight phosphotyrosine protein phosphatases
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   217..220.........230.........240.........250.........260.........270......
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Query Sequence  RVNAADIENRVLELNKKQESEDTAKAGFWEEFESLQKQEVKNLHQRLEGQRPENKSKNRY
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Template Sequence  AIRVADLLQHITQMKCAEG. . . . . . YGFKEEYESFFEGQS. . . APWDSAKKDENRMKNRY
Template Known Secondary structure 
TTT......TS

S

...S

TTTT
GGGGGG
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   879880.........890....... ..900.........910.. .......920.........
 
   277..280.........290.........300.........310.........320.........330......
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Query Sequence  KNILPFDHSRVILQGRDSNIPGSDYINANYVKNQLLGPDENSKTYIASQGCLDATVNDFW
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Template Sequence  GNIIAYDHSRVRLQTIE. GDTNSDYINGNYIDGY. . . . . HRPNHYIATQGPMQETIYDFW
Template Known Secondary structure  TTS


GGG



T.T
TTTTT.....T



GGG
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   930.........940...... ...950.........960.. .......970.........980...
 
   337..340.........350.........360.........370.........380.........390......
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Query Sequence  QMAWQENTRVIVMTTREVEKGRNKCVPYWPEVGTQRVYGLYSVTNSREHDTAEYKLRTLQ
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Template Sequence  RMVWHENTASIIMVTNLVEVGRVKCCKYWPDD. . TEIYKDIKVTLIETELLAEYVIRTFA
Template Known Secondary structure  TT


S
STT
S


S
SS..TTTT
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   984.....990.........1000.........1010..... ....1020.........1030.........1040.
 
   397..400.........410.........420.........430.........440.........450......
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Query Sequence  ISPLDNGDLVREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHCSAG
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Template Sequence  VEKRGVHEI. REIRQFHFTGWPDHGVPYHATGLLGFVRQVKSKSPP. . SAGPLVVHCSAG
Template Known Secondary structure  TT



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S
SSS

S
SS
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   1042.......1050 .........1060.........1070.........1080...... ...1090........
 
   457..460.........470.........480.........490.........500.........510......
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Query Sequence  IGRTGTIIVIDMLMESISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFI
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Template Sequence  AGRTGCFIVIDIMLDMAEREG. . . VVDIYNCVRELRSRRVNMVQTEEQYVFIHDAILEAC
Template Known Secondary structure  SS...
STTSS
S
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   10991100.........1110......... 1120.........1130.........1140.........1150.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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