 |
| Job Description | P29351 | | Confidence | 52.21% | Date | Wed Jul 10 14:09:17 BST 2013 |
| Rank | 218 | Aligned Residues | 95 |
| % Identity | 13% | Template | d1jm6a1 |
| SCOP info | Bromodomain-like
| alpha-ketoacid dehydrogenase kinase, N-terminal domain
| alpha-ketoacid dehydrogenase kinase, N-terminal domain
|
| Resolution | 2.50 |
|
 |
|   |   |
182 | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 230 |
| Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
| Query Sequence |   |
E | T | F | D | S | L | T | D | L | V | E | H | F | K | K | T | G | I | E | E | A | S | G | A | F | V | Y | L | R | Q | P | Y | Y | A | T | R | V | N | A | A | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | E | N | R | V | L | E | L |
| Query Conservation |   |
  |   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|   |
|   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |
| . | . | . | . | . |
|
|   |
|
|   |   |
|
|   |   |   |   |   |
|
|   |
|
|   |   |
|
|
|
|
|
|
|   |
|
|   |
|
|
| Template Sequence |   |
A | S | L | A | G | A | P | K | Y | I | E | H | F | S | K | F | S | P | S | P | L | . |
. |
. |
. |
. |
S | M | K | Q | F | L | D | F | G | A | C | E | K | T | S | F | T | F | L | R | Q | E | L | P | V | R | L | A | N | I | M | K | E | I |
| Template Known Secondary structure |   |
|
| T | T | S |  |  |  |  |  |  |  |  | T | T | S |
|
|
|
|
| . | . | . | . | . |
|  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . |
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
1003 | . | . | . | . | . | . | 1010 | . | . | . | . | . | . | . | . | . | 1020 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . |
|   |
|   |   |
231 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | |
|
|
. | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . |
| Predicted Secondary structure |   |
 |  |
| . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
N | K | K | . |
. |
. |
. |
. |
. |
Q | E | S | E | D | T | A | K | A | G | F | W | E | E | F | E | S | L | Q | K | Q | E | . |
. |
. |
V | K | N | L | H | Q | R | L | E | G | Q | R | P | E | N | K | S | K | N | R | Y | K | N | I | L | P |
| Query Conservation |   |
  |   |   | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |
|
|   |
|
| Alig confidence |   |
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|
|   |   |
|   |   |   |
|   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|
|   |   |
|
|   |
| Template Sequence |   |
N | L | L | P | D | R | V | L | S | T | P | S | V | Q | L | V | Q | S | W | Y | V | Q | S | L | L | D | I | M | E | F | L | D | K | D | P | E | D | H | R | T | L | S | Q | F | T | D | A | L | V | T | I | R | N | R | H | N | D | V | V | P |
| Template Known Secondary structure |   |
T | T | S |
|  |  |  |  | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S |
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |  |  |  |
| Template Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
1061 | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|