Job Description P29351 Confidence 29.24% Date Wed Jul 10 14:09:17 BST 2013 Rank 249 Aligned Residues 67 % Identity 10% Template c4h61A_ PDB info PDB header:transcription Chain: A: PDB Molecule:mediator of rna polymerase ii transcription subunit 6; PDBTitle: structure of the schizosaccharomyces pombe mediator subunit med6 Resolution 2.70 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	D	L	S	G	P	D	A	E	T	L	L	K	G	R	G	V	P	G	S	F	L	A	R	P	S	R	K	N	Q	G	D	F	S	L	S	V	R	V	D	D	Q	V	T	H	I	R	I	Q	N	S	G	D	F	Y	D	L	Y	G
Query Conservation
Alig confidence																		.	.																																		.	.	.
Template Conservation																		.	.																																		.	.	.
Template Sequence		F	N	A	L	D	L	G	D	L	N	S	Q	L	K	R	L	.	.	T	G	I	Q	F	V	I	I	H	E	R	P	P	F	L	W	V	I	Q	K	Q	N	R	L	N	E	N	E	V	K	P	L	T	.	.	.	V	Y	F	V	C	N
Template Known Secondary structure			T	T												T		.	.												T	T	T											S	S	S							.	.	.						T
Template Predicted Secondary structure																		.	.																																		.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.
		66	.	.	.			70	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		G	E	K	F	.	.	A	T	L	T	E	L	V	E
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		E	N	I	Y	M	A	P	N	A	Y	T	L	L	A
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D