Job Description P29351 Confidence 100.00% Date Wed Jul 10 14:09:17 BST 2013 Rank 40 Aligned Residues 254 % Identity 31% Template c3m4uB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:tyrosine specific protein phosphatase, putative; PDBTitle: crystal structure of trypanosoma brucei protein tyrosine phosphatase2 tbptp1 Resolution 2.39 Å

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		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	F	W	E	E	F	E	S	L	Q	K	Q	E	V	K	N	L	H	Q	R	L	E	G	Q	R	P	E	N	K	S	K	N	R	Y	K	N	I	L	P	F	D	H	S	R	V	I	L	Q	G	R	D	S	N	I	P	G	S	D	Y
Query Conservation
Alig confidence																			.	.																																.	.	.	.	.	.	.
Template Conservation																			.	.																																.	.	.	.	.	.	.
Template Sequence		S	R	M	Q	R	E	F	V	Q	L	Q	R	Q	E	N	P	R	.	.	N	I	N	F	T	T	S	L	K	N	R	H	K	N	R	Y	L	D	I	L	A	N	E	E	T	I	Y	P	P	V	L	.	.	.	.	.	.	.	Y	P	Y
Template Known Secondary structure													T	T	S		G	G	.	.	G	S								T	G	G	G		S	S	T	T					S	T	T			S				.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.																																.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.								.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	A	N	Y	V	K	N	Q	L	L	G	P	D	E	N	S	K	T	Y	I	A	S	Q	G	C	L	D	A	T	V	N	D	F	W	Q	M	A	W	Q	E	N	T	R	V	I	V	M	T	T	R	E	V	E	K	G	R	N	K	C
Query Conservation
Alig confidence										.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.
Template Sequence		I	N	G	N	L	I	D	L	.	.	.	.	.	.	D	L	P	H	T	F	V	A	C	Q	A	P	V	P	Q	G	V	P	D	F	L	E	T	L	S	E	K	K	V	D	L	V	V	M	L	T	K	L	R	E	G	G	V	L	K	A
Template Known Secondary structure			S							.	.	.	.	.	.	S	S	S	S										G	G	G											T	T								S		S			T	T
Template Predicted Secondary structure										.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.							.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.						.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		V	P	Y	W	P	E	V	G	T	Q	R	V	Y	G	L	Y	S	V	T	N	S	R	E	H	D	.	.	.	.	.	T	A	E	Y	K	L	R	T	L	Q	I	S	P	L	D	N	G	D	L	V	R	E	I	W	H	Y	Q	Y	L	S
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.													.	.
Template Conservation																																												.	.
Template Sequence		E	R	Y	W	P	E	E	E	D	S	L	S	F	D	A	I	K	V	T	R	D	A	E	A	S	Y	E	V	D	A	E	L	D	I	V	R	R	P	L	V	I	H	.	.	V	P	G	K	P	M	H	R	V	L	Q	V	Q	Y	V	G
Template Known Secondary structure					S																	B	T	T	B						T	T	T	T										.	.		T	T	S												S
Template Predicted Secondary structure																																												.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	P	D	H	G	V	P	S	E	P	G	G	V	L	S	F	L	D	Q	I	N	Q	R	Q	E	S	L	P	H	A	G	P	I	I	V	H	C	S	A	G	I	G	R	T	G	T	I	I	V	I	D	M	L	M	E	S	I	S	T	K
Query Conservation
Alig confidence																										.	.	.	.
Template Conservation																										.	.	.	.
Template Sequence		W	P	D	H	G	V	P	E	S	A	A	S	F	D	E	L	L	S	V	I	K	N	C	V	.	.	.	.	T	T	S	P	I	L	V	H	C	S	A	G	I	G	R	T	G	T	L	I	G	A	Y	A	A	L	L	H	I	E	R	G
Template Known Secondary structure				T	T	S			S														T			.	.	.	.		S	S							S	S	S	S																		T	T
Template Predicted Secondary structure																										.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220					.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	D	C	D	I	D	I	Q	K	T	I	Q	M	V	R	A	Q	R	S	G	M	V	Q	T	E	A	Q	Y	K	F	I	Y	V	A	I	A	Q	F	I	E
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		I	.	L	T	D	S	T	V	Y	S	I	V	A	A	M	K	Q	K	R	F	G	M	V	Q	R	L	E	Q	Y	A	V	I	Y	M	T	V	L	G	R	L	G
Template Known Secondary structure			.			T	T													S	T	T		S		S															T	T
Template Predicted Secondary structure			.
Template SS confidence
		253		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D