Job Description P29351 Confidence 100.00% Date Wed Jul 10 14:09:17 BST 2013 Rank 16 Aligned Residues 280 % Identity 36% Template c3i36A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:vascular protein tyrosine phosphatase 1; PDBTitle: crystal structure of rat protein tyrosine phosphatase eta catalytic2 domain Resolution 1.84 Å Model Dimensions (Å) X:53.789 Y:58.922 Z:38.986

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		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	A	A	D	I	E	N	R	V	L	E	L	N	K	K	Q	E	S	E	D	T	A	K	A	G	F	W	E	E	F	E	S	L	Q	K	Q	E	V	K	N	L	H	Q	R	L	E	G	Q	R	P	E	N	K	S	K	N	R	Y	K
Query Conservation
Alig confidence																.	.	.	.	.	.																						.	.
Template Conservation																.	.	.	.	.	.																						.	.
Template Sequence		I	R	V	E	N	F	E	A	Y	F	K	K	Q	Q	.	.	.	.	.	.	A	D	S	N	C	G	F	A	E	E	Y	E	D	L	K	L	I	G	I	S	L	.	.	P	K	Y	A	A	E	I	A	E	N	R	G	K	N	R	Y	N
Template Known Secondary structure																.	.	.	.	.	.															T	T	T	T	T	T	S	.	.							S					T	T		S	S	T
Template Predicted Secondary structure																.	.	.	.	.	.																						.	.
Template SS confidence
		900	.	.	.	.	.	.	.	.	.	910	.	.	.							.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.			.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	L	P	F	D	H	S	R	V	I	L	Q	G	R	D	S	N	I	P	G	S	D	Y	I	N	A	N	Y	V	K	N	Q	L	L	G	P	D	E	N	S	K	T	Y	I	A	S	Q	G	C	L	D	A	T	V	N	D	F	W	Q
Query Conservation
Alig confidence																					.	.													.	.	.	.	.
Template Conservation																					.	.													.	.	.	.	.
Template Sequence		N	V	L	P	Y	D	I	S	R	V	K	L	S	V	Q	T	H	S	T	.	.	D	D	Y	I	N	A	N	Y	M	P	G	Y	.	.	.	.	.	H	S	K	K	D	F	I	A	T	Q	G	P	L	P	N	T	L	K	D	F	W	R
Template Known Secondary structure		T					T	T	T							S	S	S	G	G	.	.	G	G										S	.	.	.	.	.	S		T	T	S									G	G	G
Template Predicted Secondary structure																					.	.													.	.	.	.	.
Template SS confidence
		952	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970			.	.	.	.	.	.	.	.	.	980	.	.						.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	W	Q	E	N	T	R	V	I	V	M	T	T	R	E	V	E	K	G	R	N	K	C	V	P	Y	W	P	E	V	G	T	Q	R	V	Y	G	L	Y	S	V	T	N	S	R	E	H	D	T	A	E	Y	K	L	R	T	L	Q	I
Query Conservation
Alig confidence																																		.
Template Conservation																																		.
Template Sequence		M	V	W	E	K	N	V	Y	A	I	V	M	L	T	K	C	V	E	Q	G	R	T	K	C	E	E	Y	W	P	S	K	Q	.	A	Q	D	Y	G	D	I	T	V	A	M	T	S	E	V	V	L	P	E	W	T	I	R	D	F	V	V
Template Known Secondary structure						T	T								S		S	B	S	S	S	S	B		S				S			S	S	.					T	T												S	S
Template Predicted Secondary structure																																		.
Template SS confidence
		1005	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.		.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	L	D	N	G	D	L	V	R	E	I	W	H	Y	Q	Y	L	S	W	P	D	H	G	V	P	S	E	P	G	G	V	L	S	F	L	D	Q	I	N	Q	R	Q	E	S	L	P	H	A	G	P	I	I	V	H	C	S	A	G	I
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		K	N	M	.	Q	S	S	E	S	H	P	L	R	Q	F	H	F	T	S	W	P	D	H	G	V	P	D	T	T	D	L	L	I	N	F	R	Y	L	V	R	D	Y	M	K	Q	I	P	P	E	S	P	I	L	V	H	C	S	A	G	V
Template Known Secondary structure				T	.	T	T	T													S		S	S	S	S		S		S															T	T	S		S	S							S	S	S	S	S
Template Predicted Secondary structure					.
Template SS confidence
		1064	.	.		.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	T	G	T	I	I	V	I	D	M	L	M	E	S	I	S	T	K	G	L	D	C	D	I	D	I	Q	K	T	I	Q	M	V	R	A	Q	R	S	G	M	V	Q	T	E	A	Q	Y	K	F	I	Y	V	A	I	A	Q	F	I	E
Query Conservation
Alig confidence																						.	.	.
Template Conservation																						.	.	.
Template Sequence		G	R	T	G	T	F	I	A	I	D	R	L	I	Y	Q	I	E	N	E	N	.	.	.	T	V	D	V	Y	G	I	V	Y	D	L	R	M	H	R	P	L	M	V	Q	T	E	D	Q	Y	V	F	L	N	Q	C	V	L	D	I	I	R
Template Known Secondary structure																					S	.	.	.													T	T	S	T	T	S	S		S
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		1123	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.				.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D