Job Description P29351 Confidence 100.00% Date Wed Jul 10 14:09:17 BST 2013 Rank 35 Aligned Residues 286 % Identity 36% Template c2qepA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:receptor-type tyrosine-protein phosphatase n2; PDBTitle: crystal structure of the d1 domain of ptprn2 (ia2beta) Resolution 2.50 Å

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		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	N	A	A	D	I	E	N	R	V	L	E	L	N	K	K	Q	E	S	E	D	T	A	K	A	G	F	W	E	E	F	E	S	L	Q	K	Q	E	V	K	N	L	H	Q	R	L	E	G	Q	R	P	E	N	K	S	K	N	R	Y
Query Conservation
Alig confidence																	.	.	.	.	.	.																							.
Template Conservation																	.	.	.	.	.	.																							.
Template Sequence		D	I	S	T	G	H	M	I	L	S	Y	M	E	D	H	.	.	.	.	.	.	L	K	N	K	N	R	L	E	K	E	W	E	A	L	C	A	Y	Q	A	E	P	N	.	S	S	F	V	A	Q	R	E	E	N	V	P	K	N	R	S
Template Known Secondary structure																	.	.	.	.	.	.	T	T																		S	S		.			T	T	T	T	S	T	T	T	G	G	G		S
Template Predicted Secondary structure																	.	.	.	.	.	.																							.
Template SS confidence
		724	.	.	.	.	.	730	.	.	.	.	.	.	.	.							.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760		.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	I	L	P	F	D	H	S	R	V	I	L	Q	G	R	D	S	N	I	P	G	S	D	Y	I	N	A	N	Y	V	K	N	Q	L	L	G	P	D	E	N	S	K	T	Y	I	A	S	Q	G	C	L	D	A	T	V	N	D	F	W
Query Conservation
Alig confidence																							.													.	.	.	.
Template Conservation																							.													.	.	.	.
Template Sequence		L	A	V	L	T	Y	D	H	S	R	V	L	L	K	A	E	N	S	H	S	H	.	S	D	Y	I	N	A	S	P	I	M	D	H	.	.	.	.	D	P	R	N	P	A	Y	I	A	T	Q	G	P	L	P	A	T	V	A	D	F	W
Template Known Secondary structure		T	T					G	G	G			B			T	T	T		S	S	S	.			B		S						S	S	.	.	.	.		S	S	S		S									G	G	G
Template Predicted Secondary structure																							.													.	.	.	.
Template SS confidence
		777	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.		.	.	800	.	.	.	.	.	.	.	.	.					810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		Q	M	A	W	Q	E	N	T	R	V	I	V	M	T	T	R	E	V	E	K	G	R	N	K	C	V	P	Y	W	P	E	V	G	T	Q	R	V	Y	G	L	Y	S	V	T	N	S	R	E	H	.	D	T	A	E	Y	K	L	R	T	L
Query Conservation																																																			.
Alig confidence																																			.																.
Template Conservation																																			.
Template Sequence		Q	M	V	W	E	S	G	C	V	V	I	V	M	L	T	P	L	A	E	N	G	V	R	Q	C	Y	H	Y	W	P	D	E	G	.	S	N	L	Y	H	I	Y	E	V	N	L	V	S	E	H	I	W	C	E	D	F	L	V	R	S	F
Template Known Secondary structure							T	T								S		S			T	T				S				S		S	S	S	.					T	T													T	T
Template Predicted Secondary structure																																			.
Template SS confidence
		832	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.		.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	S	P	L	D	N	G	D	L	V	R	E	I	W	H	Y	Q	Y	L	S	W	P	D	H	G	V	P	S	E	P	G	G	V	L	S	F	L	D	Q	I	N	Q	R	Q	E	S	L	P	H	A	G	P	I	I	V	H	C	S	A
Query Conservation
Alig confidence						.																																											.	.
Template Conservation						.																																											.	.
Template Sequence		Y	L	K	N	.	L	Q	T	N	E	T	R	T	V	T	Q	F	H	F	L	S	W	Y	D	R	G	V	P	S	S	S	R	S	L	L	D	F	R	R	K	V	N	K	C	Y	R	G	.	.	R	S	C	P	I	I	V	H	C	S	D
Template Known Secondary structure						.	T	T	T	T												S			T	T	S			S																	S	S	.	.		S	S							S	S
Template Predicted Secondary structure						.																																											.	.
Template SS confidence
		891	.	.	.		.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.			.	.	.	940	.	.	.	.	.	.	.
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	G	R	T	G	T	I	I	V	I	D	M	L	M	E	S	I	S	T	K	G	L	D	C	D	I	D	I	Q	K	T	I	Q	M	V	R	A	Q	R	S	G	M	V	Q	T	E	A	Q	Y	K	F	I	Y	V	A	I	A	Q	F
Query Conservation
Alig confidence																								.	.	.
Template Conservation																								.	.	.
Template Sequence		G	A	G	R	S	G	T	Y	V	L	I	D	M	V	L	N	K	M	A	K	G	K	.	.	.	E	I	D	I	A	A	T	L	E	H	L	R	D	Q	R	P	G	M	V	Q	T	K	E	Q	F	E	F	A	L	T	A	V	A	E	E
Template Known Secondary structure		S	S																		T			.	.	.													T	T	S	T	T	S	S
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		948	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.				970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.
		516	.	.	.	520	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	T	T	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	A	I	L	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1006	.	.	.	1010	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D