Job Description P29351 Confidence 100.00% Date Wed Jul 10 14:09:17 BST 2013 Rank 17 Aligned Residues 282 % Identity 36% Template c2pa5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:tyrosine-protein phosphatase non-receptor type 9; PDBTitle: crystal structure of human protein tyrosine phosphatase ptpn9 Resolution 1.60 Å Model Dimensions (Å) X:64.713 Y:49.823 Z:45.232

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		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	Y	Y	A	T	R	V	N	A	A	D	I	E	N	R	V	L	E	L	N	K	K	Q	E	S	E	D	T	A	K	A	G	F	W	E	E	F	E	S	L	Q	K	Q	E	V	K	N	L	H	Q	R	L	E	G	Q	R	P	E	N
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																						.	.	.	.	.	.	.	.	.																				.	.
Template Sequence		H	V	P	G	P	H	A	M	T	I	Q	E	L	V	D	Y	V	N	A	R	.	.	.	.	.	.	.	.	.	Q	K	Q	G	I	Y	E	E	Y	E	D	I	R	R	E	N	P	V	G	.	.	T	F	H	C	S	M	S	P	G	N
Template Known Secondary structure		B		S		S	S		B													.	.	.	.	.	.	.	.	.															S			S	S	.	.							S	T	T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.																				.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.										.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.			.	.	320	.	.	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	K	N	R	Y	K	N	I	L	P	F	D	H	S	R	V	I	L	Q	G	R	D	S	N	I	P	G	S	D	Y	I	N	A	N	Y	V	K	N	Q	L	L	G	P	D	E	N	S	K	T	Y	I	A	S	Q	G	C	L	D	A
Query Conservation
Alig confidence																								.	.	.	.	.	.													.	.	.	.	.
Template Conservation																								.	.	.	.	.	.													.	.	.	.	.
Template Sequence		L	E	K	N	R	Y	G	D	V	P	C	L	D	Q	T	R	V	K	L	T	K	Q	.	.	.	.	.	.	T	D	Y	I	N	A	S	F	M	D	G	Y	.	.	.	.	.	K	Q	K	N	A	Y	I	G	T	Q	G	P	L	E	N
Template Known Secondary structure		G	G	G		S		T	T					T	T	T								.	.	.	.	.	.		S										B	.	.	.	.	.	T													G	G
Template Predicted Secondary structure																								.	.	.	.	.	.													.	.	.	.	.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.							350	.	.	.	.	.	.	.	.	.	360	.						.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.		.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		T	V	N	D	F	W	Q	M	A	W	Q	E	N	T	R	V	I	V	M	T	T	R	E	V	E	K	G	R	N	K	C	V	P	Y	W	P	E	V	.	G	T	Q	R	V	Y	G	L	Y	S	V	T	N	S	R	E	H	D	T	A	E
Query Conservation																																								.
Alig confidence																																								.
Template Conservation
Template Sequence		T	Y	R	D	F	W	L	M	V	W	E	Q	K	V	L	V	I	V	M	T	T	R	F	E	E	G	G	R	R	K	C	G	Q	Y	W	P	L	E	K	D	S	R	I	R	F	G	F	L	T	V	T	N	L	G	V	E	N	M	N	H
Template Known Secondary structure		G											T	T								S		S			T	T								S			S	T	T						T	T												S	S
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.					.	.	.	.
Predicted Secondary structure																																																						.	.	.	.
Query SS confidence																																																						.	.	.	.
Query Sequence		Y	K	L	R	T	L	Q	I	S	P	L	D	N	G	D	L	V	R	E	I	W	H	Y	Q	Y	L	S	W	P	D	H	G	V	P	S	E	P	G	G	V	L	S	F	L	D	Q	I	N	Q	R	Q	E	.	.	.	.	S	L	P	H
Query Conservation																																																						.	.	.	.
Alig confidence																.																																						.	.	.	.
Template Conservation																.
Template Sequence		Y	K	K	T	T	L	E	I	H	N	T	E	E	R	.	Q	K	R	Q	V	T	H	F	Q	F	L	S	W	P	D	Y	G	V	P	S	S	A	A	S	L	I	D	F	L	R	V	V	R	N	Q	Q	S	L	A	V	S	N	M	G	A
Template Known Secondary structure												T	T	T	T	.															S	S	S	S		S		S
Template Predicted Secondary structure																.
Template SS confidence
		442	.	.	.	.	.	.	.	450	.	.	.	.	.		.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	P	I	I	V	H	C	S	A	G	I	G	R	T	G	T	I	I	V	I	D	M	L	M	E	S	I	S	T	K	G	L	D	C	D	I	D	I	Q	K	T	I	Q	M	V	R	A	Q	R	S	G	M	V	Q	T	E	A	Q	Y
Query Conservation
Alig confidence																																		.	.	.
Template Conservation																																		.	.	.
Template Sequence		E	P	P	I	V	V	H	C	S	A	G	I	G	R	T	G	T	F	C	S	L	D	I	C	L	A	Q	L	E	E	L	G	.	.	.	T	L	N	V	F	Q	T	V	S	R	M	R	T	Q	R	A	F	S	I	Q	T	P	E	Q	Y
Template Known Secondary structure										S	S	S	S																				S	.	.	.		B										T	T	T	S	T	T		S		S
Template Predicted Secondary structure																																		.	.	.
Template SS confidence
		508	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.				540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
		506	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	I	Y	V	A	I	A	Q	F	I	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	F	C	Y	K	A	I	L	E	F	A	E	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		565	.	.	.	.	570	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D