Job Description P29351 Confidence 100.00% Date Wed Jul 10 14:09:17 BST 2013 Rank 6 Aligned Residues 327 % Identity 39% Template c2nlkA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protein tyrosine phosphatase, receptor type, g variant PDBTitle: crystal structure of d1 and d2 catalytic domains of human protein2 tyrosine phosphatase gamma (d1+d2 ptprg) Resolution 2.40 Å Model Dimensions (Å) X:70.845 Y:73.857 Z:56.872

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		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	N	A	A	D	I	E	N	R	V	L	E	L	N	K	K	Q	E	S	E	D	T	A	K	A	G	F	W	E	E	F	E	S	L	Q	K	Q	E	V	K	N	L	H	Q	R	L	E	G	Q	R	P	E	N	K	S	K	N	R	Y
Query Conservation
Alig confidence																		.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.
Template Sequence		A	I	P	V	K	Q	F	V	K	H	I	G	E	L	Y	S	.	.	.	.	.	.	N	N	Q	H	G	F	S	E	D	F	E	E	V	Q	R	C	T	A	D	M	N	I	T	A	E	H	S	N	H	P	E	N	K	H	K	N	R	Y
Template Known Secondary structure					G	G	G											.	.	.	.	.	.																T	T	G	G	G					T	T	T	T	S	G	G	G	G	G	G		S	S
Template Predicted Secondary structure																		.	.	.	.	.	.
Template SS confidence
		827	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.							.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	I	L	P	F	D	H	S	R	V	I	L	Q	G	R	D	S	N	I	P	G	S	D	Y	I	N	A	N	Y	V	K	N	Q	L	L	G	P	D	E	N	S	K	T	Y	I	A	S	Q	G	C	L	D	A	T	V	N	D	F	W
Query Conservation
Alig confidence																				.	.	.	.													.	.	.	.	.
Template Conservation																				.	.	.	.													.	.	.	.	.
Template Sequence		I	N	I	L	A	Y	D	H	S	R	V	K	L	R	P	L	P	H	.	.	.	.	S	D	Y	I	N	A	N	Y	V	D	G	Y	.	.	.	.	.	N	K	A	K	A	Y	I	A	T	Q	G	P	L	K	S	T	F	E	D	F	W
Template Known Secondary structure		T	T					T	T	T										.	.	.	.	T	T										T	.	.	.	.	.	T													G	G	G
Template Predicted Secondary structure																				.	.	.	.													.	.	.	.	.
Template SS confidence
		881	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.					.	900	.	.	.	.	.	.	.	.	.	910						.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	M	A	W	Q	E	N	T	R	V	I	V	M	T	T	R	E	V	E	K	G	R	N	K	C	V	P	Y	W	P	E	V	G	T	Q	R	V	Y	G	L	Y	S	V	T	N	S	R	E	H	D	T	A	E	Y	K	L	R	T	L	Q
Query Conservation
Alig confidence																																			.
Template Conservation																																			.
Template Sequence		R	M	I	W	E	Q	N	T	G	I	I	V	M	I	T	N	L	V	E	K	G	R	R	K	C	D	Q	Y	W	P	T	E	N	.	S	E	E	Y	G	N	I	I	V	T	L	K	S	T	K	I	H	A	C	Y	T	V	R	R	F	S
Template Known Secondary structure								T								S		S			T	T								S		S	S	S	.					T	T												S	S
Template Predicted Secondary structure																																			.
Template SS confidence
		937	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.		970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.
		397	.	.	400	.	.											.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.
Query Sequence		I	S	P	L	D	N	.	.	.	.	.	.	.	.	.	.	G	D	L	V	R	E	I	W	H	Y	Q	Y	L	S	W	P	D	H	G	V	P	S	E	P	G	G	V	L	S	F	L	D	Q	I	N	Q	R	Q	E	S	L	P	H	A
Query Conservation								.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.																																									.	.
Template Conservation																																																										.	.
Template Sequence		I	R	N	T	K	V	K	K	G	Q	K	G	N	P	K	G	R	Q	N	E	R	V	V	I	Q	Y	H	Y	T	Q	W	P	D	M	G	V	P	E	Y	A	L	P	V	L	T	F	V	R	R	S	S	A	A	R	M	P	.	.	E	T
Template Known Secondary structure					T	T	S					T	T		T	T			T	T														S	S	S	S		S		S													T			S	.	.	S
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		996	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.			.	.
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	I	I	V	H	C	S	A	G	I	G	R	T	G	T	I	I	V	I	D	M	L	M	E	S	I	S	T	K	G	L	D	C	D	I	D	I	Q	K	T	I	Q	M	V	R	A	Q	R	S	G	M	V	Q	T	E	A	Q	Y	K
Query Conservation
Alig confidence																																	.	.	.
Template Conservation																																	.	.	.
Template Sequence		G	P	V	L	V	H	C	S	A	G	V	G	R	T	G	T	Y	I	V	I	D	S	M	L	Q	Q	I	K	D	K	S	.	.	.	T	V	N	V	L	G	F	L	K	H	I	R	T	Q	R	N	Y	L	V	Q	T	E	E	Q	Y	I
Template Known Secondary structure									S	S	S	S																				S	.	.	.												T	T	T	S	T	T	S	S
Template Predicted Secondary structure																																	.	.	.
Template SS confidence
		1054	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.				.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110
		507	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	Y	V	A	I	A	Q	F	I	E	T	T	K	K	K	L	E	I	I	Q	S	Q	K	G	Q	E	S	E	Y	G	N	I	T	Y	P	P	A	V	R	S	A	H	A	K	A	S	R	T	S	S	K	H	K	E	E	V	Y	E	N
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	I	H	D	A	L	L	E	A	I	L	G	K	E	T	E	V	S	S	N	Q	L	H	S	Y	V	N	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	P	T	R	L	E	K	Q	F	K	L	V
Template Known Secondary structure													S							G	G	G									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1111	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.																			1140	.	.	.	.	.	.	.	.	.	1150	.	.
		567	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	S	K	S	K	K	E	E	K	V	K	K	Q	R	S	A	D	K	E	K	N	K
Query Conservation
Alig confidence			.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.
Template Sequence		T	.	.	.	.	.	.	.	Q	C	F	S	A	Q	K	E	C	N	K	E	K	N	R
Template Known Secondary structure		S	.	.	.	.	.	.	.					T	T	S	S	S		T	T	S		S
Template Predicted Secondary structure			.	.	.	.	.	.	.
Template SS confidence
		1158								.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D