Job Description P29351 Confidence 100.00% Date Wed Jul 10 14:09:17 BST 2013 Rank 34 Aligned Residues 271 % Identity 37% Template c2i75A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:tyrosine-protein phosphatase non-receptor type 4; PDBTitle: crystal structure of human protein tyrosine phosphatase n4 (ptpn4) Resolution 2.45 Å

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		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	E	L	N	K	K	Q	E	S	E	D	T	A	K	A	G	F	W	E	E	F	E	S	L	Q	K	Q	E	V	K	N	L	H	Q	R	L	E	G	Q	R	P	E	N	K	S	K	N	R	Y	K	N	I	L	P	F	D	H	S	R
Query Conservation
Alig confidence																	.	.																.	.
Template Conservation																	.	.																.	.
Template Sequence		R	E	S	M	I	Q	L	A	E	G	L	I	T	G	T	.	.	V	L	T	Q	F	D	Q	L	Y	R	K	K	P	G	M	.	.	T	M	S	C	A	K	L	P	Q	N	I	S	K	N	R	Y	R	D	I	S	P	Y	D	A	T	R
Template Known Secondary structure															T		.	.								S		S	S		T	T		.	.				S	T	T	S	T	T	T	G	G	G		S	S	T	T					G	G	G
Template Predicted Secondary structure																	.	.																.	.
Template SS confidence
		640	.	.	.	.	.	.	.	.	.	650	.	.	.	.			.	.	.	.	.	660	.	.	.	.	.	.	.	.	.			670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	L	Q	G	R	D	S	N	I	P	G	S	D	Y	I	N	A	N	Y	V	K	N	Q	L	L	G	P	D	E	N	S	K	T	Y	I	A	S	Q	G	C	L	D	A	T	V	N	D	F	W	Q	M	A	W	Q	E	N	T	R	V
Query Conservation
Alig confidence							.	.	.	.	.	.	.														.	.	.
Template Conservation							.	.	.	.	.	.	.														.	.	.
Template Sequence		V	I	L	K	G	.	.	.	.	.	.	.	N	D	Y	I	N	A	N	Y	I	N	M	E	I	.	.	.	P	S	I	I	N	Q	Y	I	A	C	Q	G	P	L	P	H	T	C	T	D	F	W	Q	M	T	W	E	Q	G	S	S	M
Template Known Secondary structure					S		.	.	.	.	.	.	.														.	.	.															G	G	G											T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.														.	.	.
Template SS confidence
		696	.	.	.	700								.	.	.	.	.	.	.	.	.	710	.	.	.				.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	M	T	T	R	E	V	E	K	G	R	N	K	C	V	P	Y	W	P	E	V	G	T	Q	R	V	Y	G	L	Y	S	V	T	N	S	R	E	H	D	T	A	E	Y	K	L	R	T	L	Q	I	S	P	L	D	N	G	D	L	V
Query Conservation
Alig confidence																																																							.
Template Conservation																																																							.
Template Sequence		V	V	M	L	T	T	Q	V	E	R	G	R	V	K	C	H	Q	Y	W	P	E	P	T	G	S	S	S	Y	G	C	Y	Q	V	T	C	H	S	E	E	G	N	T	A	Y	I	F	R	K	M	T	L	F	N	.	Q	E	K	N	E	S
Template Known Secondary structure						S		S			T	T				S				S			T	T						T	T									B			S	S											.	T	T	T	T
Template Predicted Secondary structure																																																							.
Template SS confidence
		749	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.		.	.	.	.	.	.
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	I	W	H	Y	Q	Y	L	S	W	P	D	H	G	V	P	S	E	P	G	G	V	L	S	F	L	D	Q	I	N	Q	R	Q	E	S	L	P	H	A	G	P	I	I	V	H	C	S	A	G	I	G	R	T	G	T	I	I	V	I
Query Conservation
Alig confidence																																						.	.
Template Conservation																																						.	.
Template Sequence		R	P	L	T	Q	I	Q	Y	I	A	W	P	D	H	G	V	P	D	D	S	S	D	F	L	D	F	V	C	H	V	R	N	K	R	A	G	.	.	K	E	E	P	V	V	V	H	C	S	A	G	I	G	R	T	G	V	L	I	T	M
Template Known Secondary structure														S	S	S	S		S		T															T	T	.	.			S							S	S	S	S	S
Template Predicted Secondary structure																																						.	.
Template SS confidence
		808	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.			.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.
		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	L	M	E	S	I	S	T	K	G	L	D	C	D	I	D	I	Q	K	T	I	Q	M	V	R	A	Q	R	S	G	M	V	Q	T	E	A	Q	Y	K	F	I	Y	V	A	I	A	Q	F	I	E
Query Conservation
Alig confidence													.	.	.
Template Conservation													.	.	.
Template Sequence		E	T	A	M	C	L	I	E	C	N	Q	.	.	.	P	V	Y	P	L	D	I	V	R	T	M	R	D	Q	R	A	M	M	I	Q	T	P	S	Q	Y	R	F	V	C	E	A	I	L	K	V	Y	E
Template Known Secondary structure										T	T		.	.	.													T	T	S	T	T		S		S															T
Template Predicted Secondary structure													.	.	.
Template SS confidence
		866	.	.	.	870	.	.	.	.	.	.				.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D