Job Description P29351 Confidence 100.00% Date Wed Jul 10 14:09:17 BST 2013 Rank 18 Aligned Residues 286 % Identity 42% Template c2c7sA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:receptor-type tyrosine-protein phosphatase kappa; PDBTitle: crystal structure of human protein tyrosine phosphatase2 kappa at 1.95a resolution Resolution 1.95 Å Model Dimensions (Å) X:56.511 Y:64.886 Z:41.677

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		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	A	A	D	I	E	N	R	V	L	E	L	N	K	K	Q	E	S	E	D	T	A	K	A	G	F	W	E	E	F	E	S	L	Q	K	Q	E	V	K	N	L	H	Q	R	L	E	G	Q	R	P	E	N	K	S	K	N	R	Y	K
Query Conservation
Alig confidence																.	.	.	.	.	.																					.	.	.
Template Conservation																.	.	.	.	.	.																					.	.	.
Template Sequence		I	R	V	A	D	L	L	Q	H	I	N	L	M	K	.	.	.	.	.	.	T	S	D	S	Y	G	F	K	E	E	Y	E	S	F	F	E	G	Q	S	A	.	.	.	S	W	D	V	A	K	K	D	Q	N	R	A	K	N	R	Y	G
Template Known Secondary structure				G	G	G									T	.	.	.	.	.	.	T		S	S	S								T	S			S			S	.	.	.							S	G	G	G	G	G	G		S	S	T
Template Predicted Secondary structure																.	.	.	.	.	.																					.	.	.
Template SS confidence
		868	.	870	.	.	.	.	.	.	.	.	.	880	.							.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.				.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	L	P	F	D	H	S	R	V	I	L	Q	G	R	D	S	N	I	P	G	S	D	Y	I	N	A	N	Y	V	K	N	Q	L	L	G	P	D	E	N	S	K	T	Y	I	A	S	Q	G	C	L	D	A	T	V	N	D	F	W	Q
Query Conservation
Alig confidence																				.	.	.													.	.	.	.	.
Template Conservation																				.	.	.													.	.	.	.	.
Template Sequence		N	I	I	A	Y	D	H	S	R	V	I	L	Q	P	V	D	P	S	.	.	.	S	D	Y	I	N	A	N	Y	I	D	G	Y	.	.	.	.	.	Q	R	P	S	H	Y	I	A	T	Q	G	P	V	H	E	T	V	Y	D	F	W	R
Template Known Secondary structure		T	S				G	G	G	B								G	G	.	.	.	G	G			S							T	.	.	.	.	.	T													G	G	G
Template Predicted Secondary structure																				.	.	.													.	.	.	.	.
Template SS confidence
		919	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.				.	.	.	940	.	.	.	.	.	.	.	.						.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	W	Q	E	N	T	R	V	I	V	M	T	T	R	E	V	E	K	G	R	N	K	C	V	P	Y	W	P	E	V	G	T	Q	R	V	Y	G	L	Y	S	V	T	N	S	R	E	H	D	T	A	E	Y	K	L	R	T	L	Q	I
Query Conservation
Alig confidence																																	.	.
Template Conservation																																	.	.
Template Sequence		M	I	W	Q	E	Q	S	A	C	I	V	M	V	T	N	L	V	E	V	G	R	V	K	C	Y	K	Y	W	P	D	D	.	.	T	E	V	Y	G	D	F	K	V	T	C	V	E	M	E	P	L	A	E	Y	V	V	R	T	F	T	L
Template Known Secondary structure							T								S		S			T	T				S				S		S	S	.	.					T	T												S	S
Template Predicted Secondary structure																																	.	.
Template SS confidence
		973	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.			.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	L	D	N	G	D	L	V	R	E	I	W	H	Y	Q	Y	L	S	W	P	D	H	G	V	P	S	E	P	G	G	V	L	S	F	L	D	Q	I	N	Q	R	Q	E	S	L	P	H	A	G	P	I	I	V	H	C	S	A	G	I
Query Conservation
Alig confidence				.																																											.	.
Template Conservation				.																																											.	.
Template Sequence		E	R	.	R	G	Y	N	E	I	R	E	V	K	Q	F	H	F	T	G	W	P	D	H	G	V	P	Y	H	A	T	G	L	L	S	F	I	R	R	V	K	L	S	N	P	P	.	.	S	A	G	P	I	V	V	H	C	S	A	G	A
Template Known Secondary structure				.	T	T															S		S	S	S	S		S		S														S		T	.	.	T	S								S	S	S	S
Template Predicted Secondary structure				.																																											.	.
Template SS confidence
		1031	.		.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.			.	.	.	.	.	1080	.	.	.	.	.	.	.
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	T	G	T	I	I	V	I	D	M	L	M	E	S	I	S	T	K	G	L	D	C	D	I	D	I	Q	K	T	I	Q	M	V	R	A	Q	R	S	G	M	V	Q	T	E	A	Q	Y	K	F	I	Y	V	A	I	A	Q	F	I	E
Query Conservation
Alig confidence																						.	.	.
Template Conservation																						.	.	.
Template Sequence		G	R	T	G	C	Y	I	V	I	D	I	M	L	D	M	A	E	R	E	G	.	.	.	V	V	D	I	Y	N	C	V	K	A	L	R	S	R	R	I	N	M	V	Q	T	E	E	Q	Y	I	F	I	H	D	A	I	L	E	A	C	L
Template Known Secondary structure																					S	.	.	.															S	T	T	S	S		S
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		1088	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.				.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.
		518	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	K	K	K	L	E	I	I	Q	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	G	E	T	A	I	P	V	C	E	F
Template Known Secondary structure				S	S			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		1145	.	.	.	.	1150	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D