Job Description P29351 Confidence 100.00% Date Wed Jul 10 14:09:17 BST 2013 Rank 39 Aligned Residues 277 % Identity 14% Template c1g4wR_ PDB info PDB header:signaling protein Chain: R: PDB Molecule:protein tyrosine phosphatase sptp; PDBTitle: crystal structure of the salmonella tyrosine phosphatase2 and gtpase activating protein sptp Resolution 2.20 Å

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		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Y	A	T	R	V	N	A	A	D	I	E	N	R	V	L	E	L	N	K	K	Q	E	S	E	D	T	A	K	A	G	F	W	E	E	F	E	S	L	Q	K	Q	E	V	K	N	L	H	Q	R	L	E	G	Q	R	P	E	N	K	S
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	V	A	R	F	S	Q	W	E	V	E	R	W	V	D	A	S	.	.	.	.	.	.	.	.	.	.	T	H	E	L	T	Q	A	V	K	K	I	H	V	I	A	K	E	L	K	N	V	T	A	E	L	E	K	I	P	Q	T	M
Template Known Secondary structure		S	S	S	S		G	G	G											.	.	.	.	.	.	.	.	.	.																											T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.											.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.			.	.
Predicted Secondary structure																								.																																		.	.
Query SS confidence																								.																																		.	.
Query Sequence		K	N	R	Y	K	N	I	L	P	F	D	H	S	R	V	I	L	Q	G	R	D	S	.	N	I	P	G	S	D	Y	I	N	A	N	Y	V	K	N	Q	L	L	G	P	D	E	N	S	K	T	Y	I	A	S	Q	G	C	.	.	L	D
Query Conservation																								.																																		.	.
Alig confidence																								.															.		.	.	.	.	.													.	.
Template Conservation																																							.		.	.	.	.	.
Template Sequence		S	G	P	T	L	G	L	A	R	F	A	V	S	S	I	P	I	N	Q	Q	T	Q	V	K	L	S	D	G	M	P	V	P	V	N	T	L	T	.	F	.	.	.	.	.	D	G	K	P	V	A	L	A	G	S	Y	P	K	N	T	P
Template Known Secondary structure							S			S	S		T	T	T	S				S	T	T					T	T											.		.	.	.	.	.	T	T									S			S	S
Template Predicted Secondary structure																																							.		.	.	.	.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.						.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	V	N	D	F	W	Q	M	A	W	Q	E	N	T	R	V	I	V	M	T	T	R	E	V	E	K	G	R	N	K	C	V	P	Y	W	P	E	V	G	T	Q	R	V	Y	G	L	Y	S	V	T	N	S	R	E	H	D	T	A	E
Query Conservation
Alig confidence																																							.	.	.
Template Conservation																																							.	.	.
Template Sequence		D	A	L	E	A	H	M	K	M	L	L	E	K	E	C	S	C	L	V	V	L	T	S	E	D	Q	M	Q	A	K	Q	L	P	P	Y	F	R	.	.	.	G	S	Y	T	F	G	E	V	H	T	N	S	Q	K	V	S	S	A	S	Q
Template Known Secondary structure															T		S												T	T	T	T				T	T	T	.	.	.	S					T	T									G	G	G	S
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.				.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
			390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure		.																																																										.	.
Query SS confidence		.																																																										.	.
Query Sequence		.	Y	K	L	R	T	L	Q	I	S	P	L	D	N	G	D	L	V	R	E	I	W	H	Y	Q	Y	L	S	W	P	D	H	G	V	P	S	E	P	G	G	V	L	S	F	L	D	Q	I	N	Q	R	Q	E	S	L	P	H	A	.	.
Query Conservation		.																																																										.	.
Alig confidence		.													.																																													.	.
Template Conservation															.
Template Sequence		G	E	A	I	D	Q	Y	N	M	Q	L	S	C	.	G	E	K	R	Y	T	I	P	V	L	H	V	K	N	W	P	D	H	Q	P	L	P	S	T	D	Q	L	E	Y	L	A	D	R	V	K	N	S	N	Q	N	G	A	P	G	R	S
Template Known Secondary structure		S	T	T											.	T	T												S			T	T	S			S	S													T	S						T	T		S
Template Predicted Secondary structure															.
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
						447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.		.	.	500	.
Predicted Secondary structure		.	.	.	.																																																				.
Query SS confidence		.	.	.	.																																																				.
Query Sequence		.	.	.	.	G	P	I	I	V	H	C	S	A	G	I	G	R	T	G	T	I	I	V	I	D	M	L	M	E	S	I	S	T	K	G	L	D	C	D	I	D	I	Q	K	T	I	Q	M	V	R	A	Q	R	S	G	.	M	V	Q	T
Query Conservation		.	.	.	.																																																				.
Alig confidence		.	.	.	.																										.	.	.	.	.	.	.																				.
Template Conservation																															.	.	.	.	.	.	.
Template Sequence		S	S	D	K	H	L	P	M	I	H	C	L	G	G	V	G	R	T	G	T	M	A	A	A	L	V	L	K	D	.	.	.	.	.	.	.	N	P	H	S	N	L	E	Q	V	R	A	D	F	R	D	S	R	N	N	R	M	L	E	D
Template Known Secondary structure			T	T	S	S						S	S	S	S	S															.	.	.	.	.	.	.		T	T														T		T	T	T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.
Template SS confidence
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.								500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
		502	.	.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	Q	Y	K	F	I	Y	V	A	I	A	Q	F	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	Q	F	V	Q	L	K	A	M	Q	A	Q	L	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D