Job Description P29351 Confidence 100.00% Date Wed Jul 10 14:09:17 BST 2013 Rank 49 Aligned Residues 199 % Identity 27% Template c1a81E_ PDB info PDB header:complex (transferase/peptide) Chain: E: PDB Molecule:syk kinase; PDBTitle: crystal structure of the tandem sh2 domain of the syk kinase bound to2 a dually tyrosine-phosphorylated itam Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.
Predicted Secondary structure																								.																																			.
Query SS confidence																								.																																			.
Query Sequence		V	R	W	F	H	R	D	L	S	G	P	D	A	E	T	L	L	K	G	R	G	V	.	P	G	S	F	L	A	R	P	S	R	K	N	Q	G	D	F	S	L	S	V	R	V	D	D	Q	V	T	H	I	R	I	Q	N	S	.	G	D
Query Conservation																								.																																			.
Alig confidence																								.																																			.
Template Conservation
Template Sequence		L	P	F	F	F	G	N	I	T	R	E	E	A	E	D	Y	L	V	Q	G	G	M	S	D	G	L	Y	L	L	R	Q	S	R	N	Y	L	G	G	F	A	L	S	V	A	H	G	R	K	A	H	H	Y	T	I	E	R	E	L	N	G
Template Known Secondary structure			T	T			S	S												T	T	T			T	T								S	S	S	T	T									S	S	S										T	T	T
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.												.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	Y	D	L	Y	G	G	E	K	F	A	T	L	T	E	L	V	E	Y	Y	T	Q	Q	Q	G	I	L	Q	D	R	D	G	T	I	I	H	L	K	Y	P	L	N	C	S	D	P	.	.	.	.	.	.	.	.	.	.	.	T	S	E
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	Y	A	I	A	G	G	R	T	H	A	S	P	A	D	L	C	H	Y	H	S	Q	E	S	D	G	L	V	C	L	L	K	K	P	F	N	R	P	Q	G	V	Q	P	K	T	P	Q	L	E	K	L	I	A	T	T	A	H	E	K	M
Template Known Secondary structure						T	T	S			B	S	S									T	T			T	T	S	S	S				S	B					T	T															T	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		R	W	Y	H	G	H	I	S	G	G	Q	A	E	S	L	L	Q	A	K	G	.	E	P	W	T	F	L	V	R	E	S	L	S	Q	P	G	D	F	V	L	S	V	L	N	D	Q	P	K	A	G	P	G	S	P	L	R	V	T	H	I
Query Conservation																						.
Alig confidence																						.											.															.	.	.	.	.	.	.	.	.
Template Conservation																																	.															.	.	.	.	.	.	.	.	.
Template Sequence		P	W	F	H	G	K	I	S	R	E	E	S	E	Q	I	V	L	I	G	S	K	T	N	G	K	F	L	I	R	A	R	.	D	N	N	G	S	Y	A	L	C	L	L	H	E	G	.	.	.	.	.	.	.	.	.	K	V	L	H	Y
Template Known Secondary structure		T	T																S	S				T	T								.	S	S	S	S									T	T	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.															.	.	.	.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.										.	.	.	.	.
		168	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		K	V	M	C	E	.	G	G	R	Y	T	V	G	G	S	E	T	F	D	S	L	T	D	L	V	E	H	F	K	K	T	G	I	E	E	A	S	G	A	F	V	Y	L	R	Q	P	Y	Y
Query Conservation							.
Alig confidence							.																											.	.	.	.
Template Conservation																																		.	.	.	.
Template Sequence		R	I	D	K	D	K	T	G	K	L	S	I	P	E	G	K	K	F	D	T	L	W	Q	L	V	E	H	Y	S	Y	K	A	.	.	.	.	D	G	L	L	R	V	L	T	V	P	C	Q
Template Known Secondary structure							T	T	S					T	T	S			B	S										T	T			.	.	.	.	T	T	S	S	S				S	B
Template Predicted Secondary structure																																		.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.					.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D