Job Description O89032 Confidence 99.06% Date Wed Jul 10 14:33:53 BST 2013 Rank 233 Aligned Residues 119 % Identity 18% Template c4ikbB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:sorting nexin-11; PDBTitle: crystal structure of snx11 px domain Resolution 1.78 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure																	.	.															.	.	.
Query SS confidence																	.	.															.	.	.
Query Sequence		V	Q	D	A	T	V	V	D	V	E	K	R	R	S	P	.	.	S	K	H	Y	V	Y	I	I	N	V	T	W	S	D	.	.	.	S	T	S	Q	T	I	Y	R	R	Y	S	K	F	F	D	L	Q	M	Q	L	L	D	K	F	P	I
Query Conservation																	.	.															.	.	.
Alig confidence																	.	.															.	.	.
Template Conservation
Template Sequence		V	I	T	V	R	V	Q	D	P	R	V	Q	N	E	G	S	W	N	S	Y	V	D	Y	K	I	F	L	H	T	N	S	K	A	F	T	A	K	T	S	V	R	R	R	Y	R	E	F	V	W	L	R	K	Q	L	Q	R	N	A	G	L
Template Known Secondary structure														S	T	T	S	T	T														T	T	S	S		S	B																					T	T
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	G	Q	K	D	P	K	Q	R	I	I	P	F	L	P	G	K	I	L	F	R	R	S	H	I	R	D	V	A	V	K	R	L	K	P	I	D	E	Y	C	R	A	L	V	R	L	P	P	H	I	S	Q	C	D	E	V	F	R	F
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.																.																						.
Template Conservation			.	.	.	.	.	.	.	.	.																.																						.
Template Sequence		V	.	.	.	.	.	.	.	.	.	P	V	P	E	L	P	G	K	S	T	F	F	G	T	S	.	D	E	F	I	E	K	R	R	Q	G	L	Q	H	F	L	E	K	V	L	Q	S	.	V	V	L	L	S	D	S	Q	L	H	L	F
Template Known Secondary structure		S	.	.	.	.	.	.	.	.	.								S				S	S	S		.																				T	S	.	S	T	T	T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.																.																						.
Template SS confidence
		77										.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	A	R	P	E	D	V	N	P	P	K	E	D	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	S	Q	L	S	V	P	E	I	E	A	V	Q	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D