Job Description O89032 Confidence 95.54% Date Wed Jul 10 14:33:53 BST 2013 Rank 274 Aligned Residues 108 % Identity 8% Template c3mpxA_ PDB info PDB header:lipid binding protein Chain: A: PDB Molecule:fyve, rhogef and ph domain-containing protein 5; PDBTitle: crystal structure of the dh and ph-1 domains of human fgd5 Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		V	V	D	V	E	K	R	R	S	P	S	K	H	Y	V	.	.	Y	I	I	N	V	T	W	S	D	S	T	S	Q	T	I	Y	R	R	Y	S	K	F	F	D	L	Q	M	Q	L	L	D	K	F	P	I	E	G	G	Q	K	D	P	K
Query Conservation																	.	.
Alig confidence																	.	.																														.
Template Conservation																																																.
Template Sequence		V	A	D	V	F	L	A	R	E	Q	G	F	D	H	H	A	T	H	I	L	Q	F	D	R	Y	L	G	L	L	S	E	N	C	L	H	S	P	R	L	A	A	A	V	R	E	F	.	E	Q	S	T	A	K	H	R	L	L	R	V	V
Template Known Secondary structure			T					T	T	T	T	T																							T	T												.		T
Template Predicted Secondary structure																																																.
Template SS confidence
		976	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.		.	.	.	.	.	.	.	.	1030	.	.	.	.
		69	70	.	.	.	.		.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.										.
Query SS confidence								.										.
Query Sequence		Q	R	I	I	P	F	.	L	P	G	K	I	L	F	R	R	.	S	H	I	R	D	V	A	V	K	R	L	K	P	I	D	E	Y	C	R	A	L	V	R	L	P	P	H	I	S	Q	C	D	E	V	F	R
Query Conservation								.										.
Alig confidence								.										.
Template Conservation
Template Sequence		Q	R	L	F	Q	Y	Q	V	L	L	T	D	Y	L	N	N	L	C	P	D	S	A	E	Y	D	N	T	Q	G	A	L	S	L	I	S	K	V	T	D	R	A	N	D	S	X	E	Q	G	E	N	L	Q	K
Template Known Secondary structure																T	T	S		T	T	S																									T	T
Template Predicted Secondary structure
Template SS confidence
		1041	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D