Job Description O89032 Confidence 97.64% Date Wed Jul 10 14:33:53 BST 2013 Rank 255 Aligned Residues 194 % Identity 11% Template c3ksyA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:son of sevenless homolog 1; PDBTitle: crystal structure of the histone domain, dh-ph unit, and2 catalytic unit of the ras activator son of sevenless (sos) Resolution 3.18 Å

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		11	.	.	.	.	.	.	.	.	20				.	.	.	.	.		.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.
Predicted Secondary structure												.	.	.						.										.	.																				.	.	.	.	.
Query SS confidence												.	.	.						.										.	.																				.	.	.	.	.
Query Sequence		V	V	D	V	E	K	R	R	S	P	.	.	.	S	K	H	Y	V	.	Y	I	I	N	V	T	W	S	D	.	.	S	T	S	Q	T	I	Y	R	R	Y	S	K	F	F	D	L	Q	M	Q	.	.	.	.	.	L	L	D	K	F	P
Query Conservation												.	.	.						.										.	.																				.	.	.	.	.
Alig confidence												.	.	.						.										.	.																				.	.	.	.	.
Template Conservation
Template Sequence		V	G	S	C	F	E	D	L	A	E	E	L	A	F	D	P	Y	E	S	Y	A	R	D	I	L	R	P	G	F	H	D	R	F	L	S	Q	L	S	K	P	G	A	A	L	Y	L	Q	S	I	G	E	G	F	K	E	A	V	Q	Y	V
Template Known Secondary structure												T	T	T	T	S												T	T							T	T	S	S	S	T	T										T	T								T
Template Predicted Secondary structure
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		I	E	G	G	Q	K	D	P	K	Q	R	I	I	P	F	.	L	P	G	K	I	L	F	R	R	S	H	I	R	D	V	A	V	K	R	L	K	P	I	D	E	Y	C	R	A	L	V	R	L	P	P	H	I	S	Q	C	D	E	V	F
Query Conservation																	.
Alig confidence																	.																													.	.
Template Conservation																																														.	.
Template Sequence		L	P	R	L	L	L	A	P	V	Y	H	C	L	H	Y	F	E	L	L	K	Q	L	E	E	K	S	E	D	Q	E	D	K	E	C	L	K	Q	A	I	T	A	L	L	N	.	.	V	Q	S	G	M	E	K	I	C	S	K	S	L	A
Template Known Secondary structure						T	T																			S																	T			.	.									T	T	S	T	T
Template Predicted Secondary structure																																														.	.
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.			.	.	.	.	.	.	.	390	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.								.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																.										.	.																.	.	.	.	.	.	.
Query SS confidence																.										.	.																.	.	.	.	.	.	.
Query Sequence		R	F	F	E	A	R	P	E	D	V	N	P	P	K	.	E	D	Y	G	S	S	K	R	K	.	.	S	V	W	L	S	S	W	A	E	S	P	K	K	D	V	.	.	.	.	.	.	.	T	G	A	D	T	N	A	E	P	M	I	L
Query Conservation																.										.	.																.	.	.	.	.	.	.
Alig confidence																.										.	.																.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	R	R	L	S	E	S	A	A	I	K	K	M	N	E	I	Q	K	N	I	D	G	W	E	G	K	D	I	G	Q	C	C	N	E	F	I	M	E	G	T	L	T	R	V	G	A	K	H	E	R	H	I	F	L	F	D	G	L	M	I
Template Known Secondary structure												S								T	S	S	S			S	S		G	G	G	T		S											T	T		S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
		169	170																	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.					.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Query Sequence		E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	V	V	S	N	Y	K	K	Q	E	N	S	E	L	S	L	Q	A	G	E	.	.	.	.	V	V	D	V	I	E	K	N	E	S	G	W	W	F	V
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Conservation
Template Sequence		C	C	K	S	N	H	G	Q	P	R	L	P	G	A	S	N	A	E	Y	R	L	K	E	K	F	F	M	R	K	V	Q	I	N	D	K	D	D	T	N	E	Y	K	H	A	F	E	I	I	L	K	D	E	N	S	V	I	F	S
Template Known Secondary structure							T	T					T	T	S				S										S	S									S	S	S			S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D