 |
| Job Description | O89032 | | Confidence | 99.68% | Date | Wed Jul 10 14:33:53 BST 2013 |
| Rank | 107 | Aligned Residues | 60 |
| % Identity | 12% | Template | c2rqvA_ |
| PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:bud emergence protein 1; |
PDBTitle: solution structure of sh3ci domain of bem1p
|
| Resolution | UNK |
|
 |
|   |   |
1064 | . | . | . | . | . | 1070 | . | . | . | . | . | . | |
. | . | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . |
| Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | K | D | V | Y | I | S | I | A | D | Y | E | G | . |
D | E | E | T | A | G | F | Q | E | G | V | S | M | E | V | L | E | K | N | P | N | G | W | W | Y | C | Q | I | L | D | E | V | K | P | F | K | G | W | V | P | S | N | Y | L | E | K |
| Query Conservation |   |
  |   |   |   |   |   |
|
|
|
|
|   |
| . |   |   |
|
|
|
|
|   |   |
|
|   |
|   |
|
|   |
|   |
|   |
|
|
|   |
|
|
|   |
|   |   |   |   |
|   |
|   |
|
|
|
|
|
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |
|
|   |
|
|
|
|
|   |   |   |   |   |   |
|
|
|   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   | . |   |   |
|   |   |
|   |   |
|   |   |
|
|   |   |
| Template Sequence |   |
G | S | L | Y | A | I | V | L | Y | D | F | K | A | E | K | A | D | E | L | T | T | Y | V | G | E | N | L | F | I | C | A | H | H | N | C | E | W | F | I | A | K | P | I | G | . |
R | L | G | G | P | G | L | V | P | V | G | F | V | S | I |
| Template Known Secondary structure |   |
S |
|
|
|  |  |  | S | S |
|
|
|
|
| S | S | S | B |
|
|
|
| S | S |  |  |  |
|
|
|
|  |  | T | T | T |  |  |  |  |
|
| S | S | . | S | S |
|
|
|  |  |  |  | S | T | T |
| B |
|
| Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | |
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . |
|   |
|   |   |
1123 | . |
| Predicted Secondary structure |   |
|
|
| Query SS confidence |   |
|
|
| Query Sequence |   |
K | N |
| Query Conservation |   |
  |   |
| Alig confidence |   |
|
|
| Template Conservation |   |
  |
|
| Template Sequence |   |
I | D |
| Template Known Secondary structure |   |
|
|
| Template Predicted Secondary structure |   |
 |  |
| Template SS confidence |   |
|
|
|   |   |
215 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|