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Job DescriptionO89032
Confidence99.72%DateWed Jul 10 14:33:53 BST 2013
Rank40Aligned Residues56
% Identity27%Templatec2df6A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:rho guanine nucleotide exchange factor 7; PDBTitle: crystal structure of the sh3 domain of betapix in complex2 with a high affinity peptide from pak2
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1063......1070...... ...1080.........1090.........1100.........1110.........1120.
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Query Sequence  NLKDVYISIADYEG. DEETAGFQEGVSMEVLEKNPNGWWYCQILDEVKPFKGWVPSNYLE
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Template Sequence  PLGSVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTHNG. . . . RTGWFPSNYVR
Template Known Secondary structure 
TT
SS
B

SSTTB

B
TT

SSSTT....GGG
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   6...10.........20.........30.........40.........50 .........60.
 
   1122
Predicted Secondary structure 
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Query Sequence  K
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Template Sequence  E
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   62
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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