Job Description O89032 Confidence 99.20% Date Wed Jul 10 14:33:53 BST 2013 Rank 228 Aligned Residues 119 % Identity 13% Template c2cskA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:sorting nexin 12; PDBTitle: solution structure of px domain from human snx12 Resolution UNK

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure																						.									.	.	.	.
Query SS confidence																						.									.	.	.	.
Query Sequence		V	Q	D	A	T	V	V	D	V	E	K	R	R	S	P	S	K	H	Y	V	.	Y	I	I	N	V	T	W	S	.	.	.	.	D	S	T	S	Q	T	I	Y	R	R	Y	S	K	F	F	D	L	Q	M	Q	L	L	D	K	F	P	I
Query Conservation																						.									.	.	.	.
Alig confidence																						.									.	.	.	.																											.
Template Conservation																																																													.
Template Sequence		F	L	E	I	D	I	F	N	P	Q	T	V	G	V	G	R	A	R	F	T	T	Y	E	V	R	M	R	T	N	L	P	I	F	K	L	K	E	S	C	V	R	R	R	Y	S	D	F	E	W	L	K	N	E	L	E	R	D	S	K	.
Template Known Secondary structure														S	S	S	S	S														S	S	S	S		S																			S	S	S	S	S	.
Template Predicted Secondary structure																																																													.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	G	Q	K	D	P	K	Q	R	I	I	P	F	L	P	G	K	I	L	F	R	R	S	H	I	R	D	V	A	V	K	R	L	K	P	I	D	E	Y	C	R	A	L	V	R	L	P	P	H	I	S	Q	C	D	E	V	F	R	F
Query Conservation
Alig confidence																											.																						.
Template Conservation																											.																						.
Template Sequence		I	V	V	P	P	L	P	G	K	A	L	K	R	Q	L	P	F	R	G	D	E	G	I	F	E	.	E	S	F	I	E	E	R	R	Q	G	L	E	Q	F	I	N	K	I	A	G	H	.	P	L	A	Q	N	E	R	C	L	H	M	F
Template Known Secondary structure								S							S	S	T	T				S	S				.																						.
Template Predicted Secondary structure																											.																						.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.
		121	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	A	R	P	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	E	E	A	I	D
Template Known Secondary structure		T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D