Return to main results Retrieve Phyre Job Id

Job DescriptionO89032
Confidence60.69%DateWed Jul 10 14:33:53 BST 2013
Rank307Aligned Residues99
% Identity14%Templatec1xovA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:ply protein; PDBTitle: the crystal structure of the listeria monocytogenes bacteriophage psa2 endolysin plypsa
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   187..190.........200.........210.........220.........230.........240......
Predicted Secondary structure 



































Query SS confidence 



























































Query Sequence  LQAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEVSKRRKA
Query Conservation     

 
 
       
         
 

   

                         
Alig confidence 













.


























..................
Template Conservation     
      
   . 


   


  
    
         ..................
Template Sequence  YKAGSSLLVYEHNK. YWYKAYINDKLCYIYKSFCISNGKKDA. . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT

SS.STTGGG



ST..................
Template Predicted Secondary structure 









.








..................
Template SS confidence 



























































   208.210.........220. ........230.........240........
 
   247..250.........260.........270.........280...... ...290.........300
Predicted Secondary structure 



































......








Query SS confidence 







































. . . . . .













Query Sequence  HLRRLDRRWTLGGMVNRQHSREEKYVTVQPYTSQSKDEIG. . . . . . FEKGVTVEVIRKNL
Query Conservation                                        
 ......   
    
     
Alig confidence  ...............
























......













Template Conservation  ...............

               
       
  

    
          
Template Sequence  . . . . . . . . . . . . . . . KGRIKVRIKSAKDLRIPVWNNTKLNSGKIKWYSPGTKLSWYDNKK
Template Known Secondary structure  ...............T



TTT

SSTT
SSSS
TT


SS
Template Predicted Secondary structure  ...............














Template SS confidence 



























































   249250.........260.........270.........280.........290...
 
   301........310.........320
Predicted Secondary structure 








Query SS confidence 



















Query Sequence  EGWWYIRYLGKEGWAPASYL
Query Conservation    
         
  
    
Alig confidence  .


















Template Conservation  .     
      

   
 
Template Sequence  . GYLELWYEKDGWYYTANYF
Template Known Secondary structure  .SSTTT
GGG
Template Predicted Secondary structure  .




Template SS confidence 



















   294.....300.........310..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D